Bioinformatics. 2023 Mar 24:btad154. doi: 10.1093/bioinformatics/btad154. Online ahead of print.
ABSTRACT
SUMMARY: HiCube is a lightweight web application for interactive visualization and exploration of diverse types of genomics data at multiscale resolutions. Especially, HiCube displays synchronized views of Hi-C contact maps and three-dimensional (3D) genome structures with user-friendly annotation and configuration tools, thereby facilitating the study of 3D genome organization and function.
AVAILABILITY AND IMPLEMENTATION: HiCube is implemented in Javascript and can be installed via NPM. The source code is freely available at GitHub (https://github.com/wmalab/HiCube).
SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
PMID:36961339 | DOI:10.1093/bioinformatics/btad154
