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Nevin Manimala Statistics

Was severe SARS-CoV-2 substantially spreading in Northern Italy before its first detection in February 2020? An evaluation of pneumonia-associated hospitalization trends from September 2014 to February 2020

Eur J Public Health. 2025 Aug 4:ckaf137. doi: 10.1093/eurpub/ckaf137. Online ahead of print.

ABSTRACT

Retrospective studies identified SARS-CoV-2 worldwide circulation as early as late 2019. In Italy, the first autochthonous COVID-19 case was diagnosed in a Northern Region on 20 February 2020, raising the question whether high numbers of COVID-19 pneumonia cases were previously undetected. We explored whether unusual increases in hospitalizations for pneumonia occurred from October 2019 to February 2020 in Italy, particularly in Northern Regions. We analysed the Italian National Hospital Discharge Records with pneumonia ICD-9-CM codes from 2014 to 2020. Trend analysis and generalized linear models with negative binomial distribution were applied to compare observed pneumonia trends in the study period with previous years. Analyses were stratified by major regions (NUTS1) and provinces. During the study period, 2 501 074 hospitalizations were coded as pneumonia. No unusual increases of all hospitalizations associated to pneumonia were observed until mid-February 2020. Hospitalizations with viral pneumonia ICD9-CM codes were negligible until the end of January 2020, with a significant increase in two provinces of Lombardy Region 1-2 weeks before the first autochthonous COVID-19 case. Our analysis showed that a small increase in viral pneumonia hospitalizations in Northern Italy only in the weeks immediately preceding the first locally acquired SARS-CoV-2 case in two provinces of Lombardy. This excludes large-scale circulation in the last months of 2019 and in January 2020. Given the mild 2019-2020 influenza season and lower pneumonia hospitalization burden, the initial increase could have been interpreted as a fluctuation as it did not determine an overall excess case-load of pneumonia hospitalizations.

PMID:40758405 | DOI:10.1093/eurpub/ckaf137

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Nevin Manimala Statistics

A Bayesian Basket Trial Design Using Local Power Prior

Biom J. 2025 Aug;67(4):e70069. doi: 10.1002/bimj.70069.

ABSTRACT

In recent years, basket trials, which allow the evaluation of an experimental therapy across multiple tumor types within a single protocol, have gained prominence in early-phase oncology development. Unlike traditional trials, which evaluate each tumor type separately and often face challenges with limited sample sizes, basket trials offer the advantage of borrowing information across various tumor types to enhance statistical power. However, a key challenge in designing basket trials is determining the appropriate extent of information borrowing while maintaining an acceptable type I error rate control. In this paper, we propose a novel three-component local power prior (local-PP) framework that introduces a dynamic and flexible approach to information borrowing. The framework consists of three components: global borrowing control, pairwise similarity assessments, and a borrowing threshold, allowing for tailored and interpretable borrowing across heterogeneous tumor types. Unlike many existing Bayesian methods that rely on computationally intensive Markov chain Monte Carlo (MCMC) sampling, the proposed approach provides a closed-form solution, significantly reducing computation time in large-scale simulations for evaluating operating characteristics. Extensive simulations demonstrate that the proposed local-PP framework performs comparably to more complex methods while significantly shortening computation time.

PMID:40758396 | DOI:10.1002/bimj.70069

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Nevin Manimala Statistics

Association of Breathing Effort With Survival in Patients With Acute Respiratory Distress Syndrome

Crit Care Med. 2025 Aug 4. doi: 10.1097/CCM.0000000000006797. Online ahead of print.

ABSTRACT

OBJECTIVES: Invasive mechanical ventilation (IMV) is crucial for acute respiratory distress syndrome (ARDS) management, but mortality remains high. While spontaneous breathing is key to weaning, excessive respiratory effort may injure the lung and diaphragm. Most existing data on respiratory effort during IMV are based on brief periods of observation, potentially underestimating the burden of inappropriate efforts. This study aims to characterize the evolution of respiratory effort over time in ARDS patients and its relation to survival. We hypothesized that nonsurvivors would spend a greater proportion of time in the high-effort range during the active breathing phase compared with survivors.

DESIGN, SETTING, AND PATIENTS: In this prospective cohort study, we continuously recorded airway pressure, flow, esophageal, and gastric pressures in ARDS patients on mechanical ventilation during 7 days after the onset of spontaneous breathing. We analyzed physiologic respiratory effort variables, focusing on the proportion of time spent within defined effort ranges, and compared these data between ICU survivors and nonsurvivors. Statistical analysis was conducted using variance weighted methods to account for variability in the number of respiratory cycles analyzed per patient. This study is registered at ClinicalTrials.gov under identifier NCT06490523.

INTERVENTIONS: None.

MEASUREMENTS AND MAIN RESULTS: A total of 1,485,405 respiratory cycles were analyzed from 26 ARDS patients (19 survivors, seven nonsurvivors). Nonsurvivors spent significantly more time in high effort (12% vs. 3%; p = 0.006). In contrast, survivors spent more time in the moderate-effort range (50% vs. 5%; p < 0.001). The time spend with high dynamic transpulmonary driving pressure (> 25 cm H2O) was also significantly different between groups (32% survivors vs. 74% nonsurvivors; p = 0.001).

CONCLUSIONS: Patients who die of ARDS are more likely to be exposed to high respiratory effort for prolonged periods of time compared with survivors.

PMID:40758388 | DOI:10.1097/CCM.0000000000006797

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Extracorporeal carbon dioxide removal for the treatment of acute hypoxaemic respiratory failure: the REST RCT

Health Technol Assess. 2025 Jul;29(33):1-16. doi: 10.3310/GJDM0320.

ABSTRACT

BACKGROUND: In patients who require mechanical ventilation for acute hypoxaemic respiratory failure, further reduction in tidal volumes, compared with conventional low tidal volume ventilation, may improve outcomes.

OBJECTIVE: To determine whether using extracorporeal carbon dioxide removal improves outcomes in patients with acute hypoxaemic respiratory failure and is cost-effective.

DESIGN: A multicentre, randomised, allocation-concealed, open-label, pragmatic clinical trial.

SETTING: Fifty-one intensive care units across the United Kingdom.

PARTICIPANTS: Four hundred and twelve adult patients receiving mechanical ventilation for acute hypoxaemic respiratory failure, of a planned sample size of 1120.

INTERVENTIONS: Lower tidal volume ventilation facilitated by extracorporeal carbon dioxide removal for at least 48 hours (n = 202) or standard care with conventional low tidal volume ventilation (n = 210).

MAIN OUTCOME MEASURES: All-cause mortality 90 days. Secondary outcomes included ventilator-free days; adverse events; extracorporeal membrane oxygenation use; long-term mortality; health-related quality of life; health service costs; long-term respiratory morbidity.

RESULTS: The trial was stopped early because of futility and feasibility. The 90-day mortality rate was 41.5% in the extracorporeal carbon dioxide removal group versus 39.5% in the standard care group (risk ratio 1.05, 95% confidence interval 0.83 to 1.33; difference 2.0%, 95% confidence interval – 7.6% to 11.5%; p = 0.68). There were significantly fewer mean ventilator-free days in the extracorporeal carbon dioxide removal group compared with the standard care group (7.1, 95% confidence interval 5.9 to 8.3) versus (9.2, 95% confidence interval 7.9 to 10.4) days; mean difference, -2.1 (95% confidence interval -3.8 to -0.3; p = 0.02). Serious adverse events were reported for 62 patients (31%) in extracorporeal carbon dioxide removal group and 18 (9%) in the standard care group, including intracranial haemorrhage in 9 patients (4.5%) versus 0 (0%) and bleeding at other sites in 6 (3.0%) versus 1 (0.5%) in the extracorporeal carbon dioxide removal group versus the control group. Two-year mortality data were available for 95% of patients. There was no difference in the time to death between groups (hazard ratio 1.08, 95% confidence interval 0.81 to 1.44; log-rank test p = 0.61). There was no difference in long-term outcomes between groups. There was no difference in quality-adjusted life-years at 12 months (mean difference -0.01, 95% confidence interval -0.06 to 0.05). Total 12-month costs were statistically significantly higher in the extracorporeal carbon dioxide removal group (mean difference £7668.76, 95% confidence interval £159.75 to £15,177.77). Secondary analyses indicated there may be heterogeneity of treatment effect based on physiological characteristics of the patients. A systematic review supported these findings.

LIMITATIONS: Only 6% of screened patients were included in the study; most sites were naive to the intervention before the study commenced; other aspects of care were not standardised in each group, because this was a pragmatic trial; the trial may have been underpowered to detect a clinically important difference, because the trial was stopped early; blinding to the clinicians or patients was not possible.

CONCLUSIONS: There were no short- or long-term benefits found, and the device was associated with higher cost and potentially significant complications. We would advise against using this device in addition to standard care for the treatment of patients with hypoxaemic respiratory failure, outside of future clinical trials.

FUTURE WORK: Future studies could further explore whether different patient populations receiving a larger ‘dose’ of from extracorporeal carbon dioxide removal might benefit, use core outcome sets and collect broader long-term outcomes and consider measuring patients’ health-related quality of life at the soonest opportunity after regaining capacity.

FUNDING: This synopsis presents independent research funded by the National Institute for Health and Care Research (NIHR) Health Technology Assessment programme as award number 13/143/02.

PMID:40758387 | DOI:10.3310/GJDM0320

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Decreased Clearance of Low-Density Lipoprotein Cholesterol is Causally Associate With Increased Mortality of Septic Shock

Crit Care Med. 2025 Aug 4. doi: 10.1097/CCM.0000000000006809. Online ahead of print.

ABSTRACT

OBJECTIVE: To determine whether low-density lipoprotein cholesterol (LDL-C) levels, set by the balance of clearance and production, causally contribute to septic shock 28-day mortality.

DESIGN: We measured LDL-C levels and genotypes in patients with septic shock. Using Genotyping and Genome-Wide Association Study summary statistics from over 150,000 Japanese participants, we genetically predicted pre-infection LDL-C levels. Two-sample Mendelian randomization was used to assess the causal relationship between predicted pre-infection LDL-C levels and 28-day mortality. We analyzed PCSK9 and 3-hydroxy-3-methylglutaryl-CoA reductase (HMGCR) genotypes to determine if LDL-C clearance or production was the underlying mechanism.

SETTING: Multicenter ICUs in Japan.

PATIENTS: Genotyped septic shock patients (n = 614).

INTERVENTIONS: None.

MEASUREMENTS AND MAIN RESULTS: Predicted pre-infection LDL-C levels were much higher than directly measured LDL-C levels at the onset of septic shock (141 mg/dL vs. 40 mg/dL, p < 0.001). Two-sample Mendelian randomization revealed that high predicted pre-infection LDL-C levels were causally associated with increased septic shock 28-day mortality (hazard ratio, 2.78; p = 0.039). PCSK9 genetic variants that increase LDL-C clearance via the LDL receptor (genetically proxied PCSK9 inhibitor treatment) were associated with decreased mortality (p = 0.003) while HMGCR genetic variants that decrease LDL-C production (genetically proxied statin treatment) were not associated with decreased septic shock mortality (indeed the opposite effect was observed, p = 0.039). The two main genetic variants driving the association between high predicted pre-infection LDL-C levels and increased mortality were in apolipoprotein genes (ApoB100-rs13306206 and ApoE-rs7412), apolipoproteins involved in LDL-C binding to the LDL receptor.

CONCLUSIONS: Low LDL-C clearance explains the causal association between high genetically predicted pre-infection LDL-C levels and increased septic shock mortality. PCSK9, ApoB, and ApoE variants were identified as causal, all related to the LDL receptor or its interaction with LDL-C. Enhancing LDL receptor-mediated clearance of pathogen lipid toxins may improve septic shock outcomes.

PMID:40758386 | DOI:10.1097/CCM.0000000000006809

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Nevin Manimala Statistics

Mechanical and Metallurgical In Vitro Evaluation of Electropolished Versus Non-Electropolished Rotary and Reciprocating Instruments

Int Endod J. 2025 Aug 4. doi: 10.1111/iej.70009. Online ahead of print.

ABSTRACT

AIM: To evaluate the effect of electropolishing on the mechanical properties of One RECI and One Curve mini nickel-titanium (NiTi) instruments by comparing electropolished and non-electropolished versions of each instrument type.

METHODOLOGY: Electropolished and non-electropolished One RECI (reciprocating) and One Curve mini (rotary) NiTi instruments, all manufactured with identical geometry and heat treatment, were evaluated. Instrument design was analysed by light microscopy and scanning electron microscopy, while metallurgical characterisation was performed using energy-dispersive X-ray spectroscopy (EDS) and differential scanning calorimetry (DSC). Mechanical performance was assessed through torsional resistance, bending and buckling load, surface microhardness, and cutting efficiency. Statistical comparisons were performed using the independent samples t-test or the Mann-Whitney U-test, with significance set at p < 0.05.

RESULTS: Design and metallurgical analyses confirmed that electropolished and non-electropolished instruments within each group were equivalent in terms of geometry, cross-sectional design, tip configuration, elemental composition, and phase transformation temperatures. Electropolishing significantly enhanced flexibility in both instrument types, as indicated by reduced bending loads and lower buckling resistance (p < 0.05). However, torsional strength was significantly reduced in the electropolished One RECI instruments, reflected by lower maximum torque and angle of rotation prior to fracture (p < 0.05). No significant torsional differences were observed in the One Curve mini group (p > 0.05). Surface microhardness and cutting efficiency remained unaffected by electropolishing in both systems (p > 0.05).

CONCLUSIONS: Electropolishing improved the flexibility of both One RECI and One Curve mini NiTi instruments without compromising their surface microhardness or cutting efficiency. However, its impact on torsional resistance was system-dependent, resulting in reduced strength only in the reciprocating One RECI instruments.

PMID:40758383 | DOI:10.1111/iej.70009

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Nevin Manimala Statistics

Acetylcholinesterase Inhibitors for Delirium Prevention: A Systematic Review and Meta-Analysis

Crit Care Med. 2025 Aug 4. doi: 10.1097/CCM.0000000000006786. Online ahead of print.

ABSTRACT

OBJECTIVES: Delirium is a frequent complication in hospitalized patients, particularly in older adults, and is associated with significant morbidity and mortality. Acetylcholinesterase inhibitors (AChEIs) have been proposed as potential agents to reduce occurrence and severity of delirium. This study aimed to evaluate the efficacy of AChEIs for both prophylaxis and treatment of delirium in hospitalized patients.

DATA SOURCES: We searched PubMed, Embase, and Web of Science. The study was registered on PROSPERO (CRD42024563798).

STUDY SELECTION: Studies comparing AChEIs and placebo for delirium in hospitalized patients.

DATA EXTRACTION: The main outcome of interest was delirium occurrence, while secondary outcomes included duration, severity, and hospital length of stay (LOS).

DATA SYNTHESIS: Subgroup analyses were performed based on prophylaxis or treatment of delirium. Statistical analysis was performed in RStudio 4.4.0 with a random effects model, and heterogeneity was assessed with I2. Risk of Bias 2 was used for bias assessment. We screened 1306 records and included ten studies: eight studies focusing on prophylaxis after surgery and two on treatment of established delirium. A total of 731 patients were analyzed: 365 in the AChEIs group and 366 in the placebo group. AChEIs significantly reduced delirium occurrence (risk ratio = 0.68 [0.47-0.98]; p = 0.039). No significant effects were observed for delirium duration (mean difference [MD] = -0.16 d [-0.9 to 0.62 d]; p = 0.23), delirium severity (standardized mean difference [SMD] = -0.08 [-0.58 to 0.41]; p = 0.74), or LOS (MD = -0.82 d [-2.03 to 0.40 d]; p = 0.19). Subgroup analysis showed a tendency for better outcomes when AChEIs were used as prophylaxis, with a significant reduction in delirium duration in this subgroup (SMD= -0.32 [-0.56 to -0.07]; p < 0.01). No significant differences in adverse events were identified.

CONCLUSIONS: AChEIs are effective in reducing occurrence of delirium when used prophylactically in patients undergoing elective surgery. AChEIs did not significantly impact on delirium duration, severity, or hospital LOS. Further studies are needed to explore the potential benefits or harms of AChEIs in different patient populations and settings.

PMID:40758382 | DOI:10.1097/CCM.0000000000006786

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Clarifying Correction Status in Retracted Study Analysis-Reply

JAMA Intern Med. 2025 Aug 4. doi: 10.1001/jamainternmed.2025.3306. Online ahead of print.

NO ABSTRACT

PMID:40758366 | DOI:10.1001/jamainternmed.2025.3306

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Nevin Manimala Statistics

Ecolabels and the Healthfulness and Carbon Footprint of Restaurant Meal Selections: A Randomized Clinical Trial

JAMA Netw Open. 2025 Aug 1;8(8):e2524773. doi: 10.1001/jamanetworkopen.2025.24773.

ABSTRACT

IMPORTANCE: Restaurants are increasingly interested in capitalizing on consumer interest in environmental sustainability by marketing their products with ecolabels, which signal when foods are more environmentally sustainable. Ecolabels could improve the healthfulness of restaurant meal selections and reduce their carbon footprint, but this potential remains largely untested.

OBJECTIVE: To test whether displaying ecolabels on restaurant menus improves the healthfulness and reduces the carbon footprint of restaurant meal selections.

DESIGN, SETTING, AND PARTICIPANTS: This randomized clinical trial was conducted online in September to October 2024. A national sample of US adults (aged ≥18 years) was recruited. Participants were randomly assigned to the ecolabel or control arm. Participants viewed a restaurant menu mimicking a popular full-service restaurant and selected items they wanted to order. Statistical analyses were based on the intention-to-treat principle.

INTERVENTIONS: In the ecolabel arm, participants viewed a menu that displayed ecolabels next to entrées and appetizers with a lower carbon footprint (ie, below the median of 1.625 kg of carbon dioxide equivalent [CO2e] emissions per item). In the control arm, participants viewed a menu that did not display ecolabels.

MAIN OUTCOMES AND MEASURES: The outcomes included overall healthfulness (assessed using Ofcom Nutrient Profiling Model scores; range: 0-100, with higher scores indicating healthier items), nutrient content, and total carbon footprint of participants’ entrée and appetizer selections and entire orders (including beverages and desserts).

RESULTS: A total of 3147 participants completed the online trial (1560 men [50%]; mean [SD] age, 34.5 [12.5] years). Participants in the ecolabel arm did not select entrées and appetizers (average differential effect [ADE], 0.45 [95% CI, -0.18 to 1.09]; P = .16; Cohen d = 0.05) or entire orders (ADE, 0.47 [95% CI, -0.09 to 1.03]; P = .10; Cohen d = 0.06) that were statistically significantly healthier compared with the selections of participants in the control arm. Participants in the ecolabel arm selected entrées and appetizers (ADE, 0.87 [95% CI, 0.12-1.62] g; P = .02; Cohen d = 0.08) and entire orders (ADE, 0.82 [95% CI, 0.07-1.56] g; P = .03; Cohen d = 0.08) with more fiber, compared with the selections of participants in the control arm, but did not select entrées and appetizers or entire orders with statistically significantly different amounts of protein, sugar, saturated fat, or calorie content. Participants in the ecolabel arm selected entrées and appetizers (ADE, -0.78 [95% CI, -1.25 to -0.32] kg of CO2e emissions; P < .001; Cohen d = -0.12) and entire orders (ADE, -0.81 [95% CI, -1.27 to -0.34] kg of CO2e emissions; P < .001; Cohen d = -0.12) with lower carbon footprints than the selections of participants in the control arm.

CONCLUSIONS AND RELEVANCE: In this randomized clinical trial, menu ecolabels reduced the carbon footprint of restaurant meal selections without worsening nutritional quality. Ecolabels could be a scalable, low-cost strategy to reduce the carbon emissions of restaurant food choices.

TRIAL REGISTRATION: ClinicalTrials.gov Identifier: NCT06584539.

PMID:40758354 | DOI:10.1001/jamanetworkopen.2025.24773

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Medicaid Payments and Racial and Ethnic Disparities in Alzheimer Disease Special Care Units

JAMA Netw Open. 2025 Aug 1;8(8):e2525057. doi: 10.1001/jamanetworkopen.2025.25057.

ABSTRACT

IMPORTANCE: Alzheimer disease special care units (ASCUs) are associated with improved outcomes for residents with dementia, yet they are unavailable in most nursing homes.

OBJECTIVES: To examine racial and ethnic disparities in the availability of ASCUs and whether more generous Medicaid payments are associated with reduced disparities.

DESIGN, SETTING, AND PARTICIPANTS: This cohort study used 2009-2019 Certification and Survey Provider Enhanced Reporting data and resident assessments from Medicare- and Medicaid-certified nursing homes in the US, as well as state Medicaid payment-to-cost ratios for 2019. Statistical analysis was performed from September to December 2024.

EXPOSURE: The percentages of Black residents and Hispanic residents in a facility and the state mean nursing homes’ ratio of Medicaid payment to estimated Medicaid cost of care.

MAIN OUTCOMES AND MEASURES: The main outcome was whether a nursing home had an ASCU. Multivariable logistic regression was conducted on ASCUs, and then separate logistic regressions were performed for states with different quartiles of Medicaid payment-to-cost ratios.

RESULTS: Most of the 13 229 nursing homes in the study were for profit (9561 [72.3%]) and were part of a chain (7775 [58.8%]). The overall mean (SD) Medicaid payment-to-cost ratio among all states was 0.87 (0.13) (range, 0.58-1.29). Each 1% increase in the percentage of Black residents was associated with a 0.1% decrease in the probability of having an ASCU. Compared with facilities with 0% to 0.8% of Black residents, the odds of having an ASCU were 37% lower in nursing homes with 4.3% to 15.2% Black residents (odds ratio [OR], 0.63; 95% CI, 0.53-0.74), and 45% lower in nursing homes with 15.2% or more of Black residents (OR, 0.55; 95% CI, 0.46-0.65). Compared with facilities with no Hispanic residents, the odds of having an ASCU were 27% lower in those with 3.7% or more of Hispanic residents (OR, 0.73; 95% CI, 0.62-0.86). In states with Medicaid payment-to-cost ratios between 0.58 and 0.81, nursing homes with 15.2% or more of Black residents were 68% less likely to have an ASCU (OR, 0.32; 95% CI, 0.21-0.50). This difference decreased to 45% in states with Medicaid payment-to-cost ratios between 0.82 and 0.94 (OR, 0.55; 95% CI, 0.44-0.69) and almost disappeared in states with Medicaid payment-to-cost ratios greater than 0.94 (OR, 0.86; 95% CI, 0.53-1.40). Higher Medicaid payment-to-cost ratios were not associated with reduced disparities among Hispanic residents.

CONCLUSIONS AND RELEVANCE: This cohort study of nursing homes suggests that racial and ethnic disparities in ASCU availability narrowed in states where Medicaid payment rates cover a greater share of costs. Racial disparities in specialized dementia care may be mitigated and even eliminated by more generous Medicaid payments.

PMID:40758352 | DOI:10.1001/jamanetworkopen.2025.25057