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Nevin Manimala Statistics

Spatial Analysis of Human and Livestock Anthrax in Lai Chau Province, Vietnam (2004-2021)

Acta Trop. 2023 Oct 20:107044. doi: 10.1016/j.actatropica.2023.107044. Online ahead of print.

ABSTRACT

Anthrax is reported globally with varying disease intensity and seasonality among countries. In Vietnam, anthrax epidemiology and ecology remain understudied. We used historical data of human and livestock anthrax from 2004-2021 in Lai Chau province, to identify spatial clusters of human and livestock anthrax, describe epidemiological characteristics, and compare livestock anthrax vaccine coverage to human and livestock disease incidence. Local Moran’s I (LISA) using spatial Bayes smoothed commune-level cumulative incidence (per 10000) for the study period, epidemiological descriptive statistics, livestock vaccine coverage data, and annual incidence rates (per 10000) at provincial level were used. LISA identified a human anthrax hotspot (high-high) in the southeast which did not overlap spatially with livestock anthrax hotspots in southeastern and northeastern communes. Most human cases were male, aged 15-59 years, handled sick animals, and/or consumed contaminated meat. Almost all cases were reported by grassroot health facilities with a delay of 6.3 days between exposure and case notification to the national surveillance system. 80% of human cases were reported from June-October. The increase in disease incidence occurred shortly after livestock anthrax vaccine coverage decreased. This study informs vaccination strategy and targeted surveillance and control measures in newly identified high-risk areas and seasons of anthrax.

PMID:37866728 | DOI:10.1016/j.actatropica.2023.107044

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Nevin Manimala Statistics

Aortic Arch Debranching and TEVAR for Type B Aortic Dissection

Ann Vasc Surg. 2023 Oct 20:S0890-5096(23)00694-5. doi: 10.1016/j.avsg.2023.08.037. Online ahead of print.

ABSTRACT

BACKGROUND: Since its introduction, thoracic endovascular aortic repair (TEVAR) has revolutionized the treatment of type B aortic dissections (TBAD). However, the proximal aspect of the aortic pathology treated may infringe on the origin of the left subclavian artery or even more proximally. Hence, to ensure durable outcomes, the origin of these vessels needs to be covered, but an extra-anatomical bypass is required to perfuse vital branches, known as aortic arch debranching. This series aims to describe and delineate the disparities of aortic arch debranching during TEVAR for TBAD.

METHODS: A retrospective review and analysis of a multicentre international database was conducted to identify patients with TBAD treated with TEVAR between 2005 to 2021. Data analyzed included patient demographics, disease characteristics, operative characteristics, and postoperative outcomes with follow-up on mortality and reintervention. All statistical analyses were carried out using IBM SPSS 26. Patient survival was calculated using a Kaplan-Meier survival analysis, and a p-value of less than 0.05 was considered statistically significant.

RESULTS: A total of 58 patients were included in the analysis, of which 27 (46.6%) presented with complicated disease and 31 were uncomplicated, of which 10 (17.2%) were classed as high risk and 21 (36.2%) low risk. Zone 2 was the most common proximal landing zone for the stent graft. Left subclavian artery bypass was performed selectively (26%), with one stroke occurring, likely due to embolic reasons. A further 6 underwent more proximal aortic debranching before TEVAR (10%) and was a significant risk factor for mortality and the number of stents deployed. The overall rates of reintervention and mortality were 17.2% (n=10) and 29.3% (n=17).

CONCLUSION: Aortic arch debranching and TEVAR for Type B aortic dissection is associated with significant mortality. Future developments to treat aortic arch pathology could incorporate branched graft devices, eliminating the need for debranching, improving stroke rates, and reducing future reinterventions.

PMID:37866676 | DOI:10.1016/j.avsg.2023.08.037

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Nevin Manimala Statistics

Identification and verification of novel ferroptosis biomarkers predicts the prognosis of hepatocellular carcinoma

Genomics. 2023 Oct 20:110733. doi: 10.1016/j.ygeno.2023.110733. Online ahead of print.

ABSTRACT

BACKGROUND: Big data mining and experiments are widely used to mine new prognostic markers.

METHODS: Candidate genes were identified from CROEMINE and FerrDb. Kaplan-Meier survival and Cox regression analysis were applied to assess the association of genes with Overall survival time (OS) and Disease-free survival time (DFS) in two HCC cohorts. Real-time quantitative polymerase chain reaction (RT-qPCR) and Immunohistochemistry were performed in HCC samples.

RESULTS: 21 and 15 genes that can predict OS and DFS, which had not been reported before, were identified from 719 genes, respectively. Survival analysis showed elevated mRNA expression of GLMP, SLC38A6, and WDR76 were associated with poor prognosis, and three genes combination signature was an independent prognostic factor in HCC. RT-qPCR and Immunohistochemistry confirmed the results.

CONCLUSIONS: We established a novel computational process, which identified the expression levels of GLMP, SLC38A6, and WDR76 as potential ferroptosis-related biomarkers indicating the prognosis of HCC.

PMID:37866659 | DOI:10.1016/j.ygeno.2023.110733

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Nevin Manimala Statistics

Physiological and behavioural adjustment of a wild rodent to laboratory conditions

Physiol Behav. 2023 Oct 20:114385. doi: 10.1016/j.physbeh.2023.114385. Online ahead of print.

ABSTRACT

Wild animals are brought to captivity for different reasons, for example to be kept in zoos and rehabilitation centres, but also for basic research. Such animals usually undergo a process of adjustment to captive conditions. While this adjustment occurs on the behavioural and the physiological level, those are usually studied separately. The aim of this study was to assess both the physiological and behavioural responses of wild wood mice, Apodemus sylvaticus, while adjusting to laboratory conditions. Over the course of four weeks, we measured in wild-caught mice brought to the laboratory faecal corticosterone metabolites and body mass as physiological parameters, stereotypic behaviour and nest-quality, as welfare-linked behavioural parameters, and four personality measures as additional behavioural parameters. The results of our study indicate that mice exhibited an adjustment in both behaviour and physiology over time in the laboratory. While the hormonal stress response decreased significantly, body mass and the proportion of stereotypic behaviours showed a tendency to increase over time. The slight increase of stereotypic behaviours, although not statistically significant, suggests the development of repetitive and non-functional behaviours as a response to laboratory conditions. However, we suggest that those behaviours might have been used by animals as a coping strategy to decrease the physiological stress response. Other behavioural parameters measured, such as boldness and nestbuilding behaviour were stable over time. The information obtained in the present study hints at a complex interplay between behavioural and physiological adjustments of wild animals to laboratory conditions, which should be considered when intending to use wild animals in experimental research.

PMID:37866641 | DOI:10.1016/j.physbeh.2023.114385

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Nevin Manimala Statistics

The interactions of aerosol and planetary boundary layer over a large city in the Mongolian Plateau

Sci Total Environ. 2023 Oct 20:167985. doi: 10.1016/j.scitotenv.2023.167985. Online ahead of print.

ABSTRACT

The interactions of aerosol and planetary boundary layer (PBL) play a crucial role in deteriorating the air quality in vast urban agglomeration areas in eastern China. However, there remains a lacking of report regarding their performance in the hazy events in Mongolian Plateau cities in northern China. In this study, half-month (01-16 January 2020) physical and material datasets of the PBL measured by multi instrumentations mounted in downtown Hohhot, a largest Mongolian Plateau city, are statistically analyzed. Results demonstrate that the aerosol-PBL feedback is of particular importance in promoting the hazy outbreak and the statistical relationship follows PBLH = -76.14 × ln(PM2.5) + 820.61. The non-linear fitting implies that there exists a potential threshold of 76.14 μg m-3 for PM2.5, below which the PBLH decrease rapidly along with the increasing of air pollutants, defined as strong aerosol-PBL interaction phase, while beyond which there is minimal decrease for PBLH even when PM reaches to a high value, i.e., the hazy accumulation phase. Using a large-eddy simulation model named as Dutch Atmospheric Large-Eddy Simulation (DALES) initialized with the synergetical observations in a representative hazy process in 11 January 2020, we found that the DALES is effective to capture the diurnal PBLH in this region. The existence of atmospheric aerosols is essential for lowering PBLH by 51.4 % from 1090 m of clean scenario to 530 m of polluted condition, postponing the development time, and advancing the afternoon lapse time. The enhancement of aerosol absorption ability strengthens the aerosol heating rate, thereby weakening the sensible heat flux, and inhibiting the development of PBLH. While opposite elevation on PBLH is found for the scattering aerosols. These findings highlight the importance of aerosol-PBL interaction in motivating the hazy episodes in Mongolian Plateau cities, which provide scientific references for the local policy-making towards pollution reductions in future.

PMID:37866603 | DOI:10.1016/j.scitotenv.2023.167985

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Nevin Manimala Statistics

Short-term effects of PM2.5 and its components exposure on endothelial function in Chinese elders

Sci Total Environ. 2023 Oct 20:167909. doi: 10.1016/j.scitotenv.2023.167909. Online ahead of print.

ABSTRACT

Particulate matter (PM2.5) and its components have been studied widely around the world and are associated with many adverse health events (e.g. cardiovascular diseases and death). Flow-mediated dilation (FMD) is a non-invasive assessment that is able to detect endothelial damage at an early stage, therefore, improving the prognosis of atherosclerotic cardiovascular disease. The current study used data from Shanghai to explore the relationship between PM2.5 and its components and FMD using multiple statistical models. The results of the analysis of 812 patients’ data (age ≥ 65) suggested that as PM2.5 level rises, endothelial function reduces. Among the five PM2.5 components included in this study, black carbon was shown by both models to be the dominating factor three days post-exposure (lag3). However, results from lag4 and lag5 were inconclusive in the two models with some evidence proposing the significance of sulphate, organic matter, and ammonium. Our results are in concordance with previous literature and further prove the significance of black carbon as an individual pollutant in the atmosphere. More research is needed to confirm the role of sulphate, organic matter, and ammonium as independent pollutants in relation to health.

PMID:37866598 | DOI:10.1016/j.scitotenv.2023.167909

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Nevin Manimala Statistics

Comparison of Direct Oral Anticoagulants versus Low Molecular Weight Heparin in Primary and Metastatic Brain Cancers: A Meta-Analysis and Systematic Review

J Thromb Haemost. 2023 Oct 20:S1538-7836(23)00779-1. doi: 10.1016/j.jtha.2023.10.011. Online ahead of print.

ABSTRACT

BACKGROUND: The safety and efficacy of direct-acting oral anticoagulants (DOACs) for therapeutic anticoagulation in the setting of primary or metastatic brain cancer is not known.

OBJECTIVE: To conduct a meta-analysis and systematic review of studies that compare the risk of intracranial hemorrhage (ICH) in patients with brain cancer treated with DOACs vs. LMWH.

METHODS: A literature search was conducted using PubMed, EMBASE, and Cochrane databases. Summary statistics were obtained by calculating the risk ratio (RR), and heterogeneity across studies was estimated using the I2 statistic. A total of 10 retrospective studies (n=1,638) met criteria for inclusion. The primary endpoint was the pooled RR for ICH in patients with brain tumors receiving anticoagulation with DOACs compared with those receiving LMWH. Secondary analyses included the risk of fatal ICH in each subgroup.

RESULTS: The pooled RR for ICH in patients receiving DOACs vs. those receiving LMWH was 0.65 (95% confidence interval [CI], 0.36-1.17; P = 0.15; I2 = 50%). In studies evaluating primary brain cancer, there was a reduction in risk of ICH with DOACs (RR, 0.35; 95% CI, 0.18-0.69; P = 0.003; I2 = 0%). In patients with metastatic brain cancer, there was no difference in the risk of ICH with type of anticoagulation (RR, 1.05; 95% CI, 0.71-1.56; P = 0.80; I2 = 0%). The overall risk of fatal ICH was not different between anticoagulants.

DISCUSSION: The risk of ICH in patients with brain cancer receiving therapeutic anticoagulation varies by anticoagulation agent and diagnosis of primary or metastatic disease.

PMID:37866517 | DOI:10.1016/j.jtha.2023.10.011

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Nevin Manimala Statistics

Liposomal Bupivacaine Interscalene Blocks Demonstrate a Greater Proportion of Total Shoulder Arthroplasty Patients with Clinically Tolerable Pain – a Retrospective Quality Improvement Study of 491 Patients

J ISAKOS. 2023 Oct 20:S2059-7754(23)00582-5. doi: 10.1016/j.jisako.2023.10.007. Online ahead of print.

ABSTRACT

OBJECTIVE: To evaluate the effects of liposomal bupivacaine use for interscalene blocks on postoperative analgesia in total shoulder arthroplasty patients.

METHODS: De-identified total or reverse total shoulder arthroplasty patients between 2018 and 2021 were analyzed. Patients were grouped into single shot interscalene block with Liposomal Bupivacaine (LB) with plain bupivacaine, Other Block (OB) with other local anesthetics (mepivacaine, ropivacaine, or plain bupivacaine), or No Block (NB). The primary outcome was the proportion of patients with clinically tolerable pain scores (mean VAS <4) from 0 – 24 hours in each group. Secondary outcomes included averaged visual analog pain scores (VAS) and opioid consumption measured in morphine milligram equivalents (MMEs) from 0 – 24 hours. We also analyzed the proportion of patients with clinically tolerable pain, mean VAS, and opioid consumption from 0 – 72 hours in those patients with at least a 3-day hospital length of stay.

RESULTS: A total of 491 de-identified total shoulder arthroplasty patients, 285 liposomal bupivacaine group (LB), 178 other block group (OB), and 28 no block group (NB), were analyzed. The primary outcome showed a statistically significant different proportion of patients with clinically tolerable pain from 0 – 24 hours in the LB group (69%) vs. OB group (39%) vs. NB group (11%) (<0.001). Secondary outcomes included statistically significant differences in VAS (LB median = 3.35, OB median = 4.38, NB median = 5.25 (p <0.001, <0.001)) and total MME opioid consumption (LB median= 40, OB median=60, NB median=88 (p < 0.001, 0.001)) between groups from 0 – 24 hours. For patients who had hospital stays of at least 3 days, a significant association was found with having achieved clinically tolerable pain 0-72 hours and the LB group (51%) vs. OB group (21%) vs. NB group (11%) (P= 0.006). However, there was no statistical difference in mean VAS or opioid consumption between these groups.

CONCLUSION: A greater proportion of total shoulder arthroplasty patients that received liposomal bupivacaine in interscalene block have clinically tolerable pain scores from 0 to 24 hours, lower VAS, and lower MME consumption in patients following total shoulder arthroplasty.

LEVEL OF EVIDENCE: Level III – Clinical Study.

PMID:37866512 | DOI:10.1016/j.jisako.2023.10.007

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Nevin Manimala Statistics

Bavachin combined with epimedin B induce idiosyncratic liver injury under immunological stress conditions

Chem Biol Interact. 2023 Oct 20:110774. doi: 10.1016/j.cbi.2023.110774. Online ahead of print.

ABSTRACT

Reports on Chinese patent medicines preparations containing Epimedii Folium (EF) and Psoraleae Fructus (PF) resulting in idiosyncratic drug-induced liver injury (IDILI) have received widespread attention. Previous studies have shown that bavachin and epimedin B-two active ingredients derived from both EF and PF-are potential components associated with IDILI, but the underlying mechanism remains unclear. We evaluated bavachin and epimedin B-induced IDILI under TNF-α-mediated immunological stress conditions and generated liver lipid metabolism profiles using lipidomics and multivariate statistical analysis. We next applied transcriptomics to identify the differential gene expression on the transcription level. Our results showed that co-exposure to bavachin, epimedin B under immunological stress conditions resulted in obvious liver injury. The differential metabolites screened in our study were closely related to the immune homeostasis of the liver. Sixteen differentially expressed genes were found, Zc3h6 and R3hdml were upregulated, while Sumo2, Cd74, Banp, Oas3, Oas2, Gbp8, Slfn8, Gbp2b, Serpina3g, Zbtb40, H2-Ab1, Osgin1, Tgtp1 and Hspa1b were all downregulated. These differentially expressed genes were associated with biological processes concerning metabolic process and immune system process. Further integrative analysis indicated that bavachin combined with epimedin B affected genes that were not only related to immune system processes, but also to lipid metabolism. Ultimately, this led to an imbalance in the immune microenvironment in the liver and may have contributed to the observed liver injury.

PMID:37866487 | DOI:10.1016/j.cbi.2023.110774

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Nevin Manimala Statistics

Student- and School-Level Factors Associated With Mental Health and Well-Being in Early Adolescence

J Am Acad Child Adolesc Psychiatry. 2023 Oct 18:S0890-8567(23)02136-6. doi: 10.1016/j.jaac.2023.10.004. Online ahead of print.

ABSTRACT

OBJECTIVE: Adolescence is a key developmental window that may determine long-term mental health. As schools may influence students’ mental health, we examined the association of school-level characteristics with students’ mental health over time.

METHOD: We analysed longitudinal data from a cluster randomised controlled trial on 8,376 students (55% female; aged 11-14 years at baseline) across 84 schools in the United Kingdom. Data collection started in the academic years 2016/2017 (Cohort 1) and 2017/2018 (Cohort 2), with follow-up at 1, 1.5, and 2 years. We explored students’ mental health (risk for depression (Center for Epidemiologic Studies-Depression Scale), social-emotional-behavioural difficulties (Strength and Difficulties Questionnaire)) and well-being (Warwick-Edinburgh Mental Well-Being Scale), and their relationship with student- and school-level characteristics, using multilevel regression models.

RESULTS: Mental health difficulties and poorer well-being increased over time, particularly in girls. Differences among schools represented a small but statistically significant proportion of variation (95% CI) in students’ mental health at each timepoint: depression: 1.7% (0.9%-2.5%) to 2.5% (1.6%-3.4%), social-emotional-behavioural difficulties: 1.9% (1.1%-2.7%) to 2.8% (2.1%-3.5%), and well-being: 1.8% (0.9%-2.7%) to 2.2% (1.4%-3.0%). Better student-rated school climate analysed as time-varying at the student- and school-level was associated with lower risk of depression (regression coefficient (95%CI) student-level: -4.25 (-4.48,-4.01), school-level: -4.28 (-5.81,-2.75)), fewer social-emotional-behavioural difficulties (student-level: -2.46 (-2.57,-2.35), school-level: -2.36 (-3.08,-1.63)), and higher well-being (student-level: 3.88 (3.70,4.05); school-level: 4.28 (3.17,5.38)), which was a stable relationship.

CONCLUSION: Student-rated school climate predicted mental health in early adolescence. Policy and system interventions that focus on school climate may promote students’ mental health.

PMID:37866473 | DOI:10.1016/j.jaac.2023.10.004