Categories
Nevin Manimala Statistics

Clinical, Sociodemographic and Environmental Risk Factors for Acute Bacterial Diarrhea among Adults and Children over Five Years in Bangladesh

Am J Trop Med Hyg. 2021 Nov 1:tpmd210580. doi: 10.4269/ajtmh.21-0580. Online ahead of print.

ABSTRACT

In 2016, diarrheal disease was the eighth leading cause of mortality globally accounting for over 1.6 million deaths with the majority of deaths in adults and children over 5 years. This study aims to investigate the clinical, sociodemographic, and environmental risk factors associated with common bacterial acute diarrhea among adults and children over 5. Data were collected from March 2019 to March 2020 in patients over 5 years presenting with acute gastroenteritis at icddr,b. Stool samples were collected from each patient for culture and polymerase chain reaction (PCR) testing. Bivariate associations between independent variables and stool-testing indicating bacterial etiology were calculated. This analysis included 2,133 diarrheal patients of whom a bacterial enteropathogen was identified in 1,537 (72%). Detection of bacteria was associated with: younger age (OR 0.92; 95% CI: 0.88-0.96), lower mean arterial pressure (OR 0.84; 95% CI: 0.79-0.89), heart rate (OR 1.06; 95% CI: 1.01-1.10), percentage dehydration (OR 1.33; 95% CI: 1.13-1.55), respiration rate (OR 1.23; 95% CI: 1.04-1.46), lower mid-upper arm circumference (OR 0.97; 95% CI: 0.94-0.99), confused/lethargic mental status (OR 1.85; 95% CI: 1.11-3.25), rice watery stool (OR 1.92; 95% CI: 1.54-2.41), and vomiting more than three times in the past 24 hours (OR 1.30; 95% CI: 1.06-1.58). Higher monthly income (OR 0.92; 95% CI: 0.86-0.98), > 8 years of education (OR 0.79; 95% CI: 0.63-1.00), and having more than five people living at home (OR 0.80; 95% CI: 0.66-0.98) were associated with lower odds of bacterial diarrhea. These findings may help guide the development of predictive tools to aid in identifying patients with bacterial diarrhea for timely and appropriate use of antibiotics.

PMID:34724626 | DOI:10.4269/ajtmh.21-0580

Categories
Nevin Manimala Statistics

Mass Spectrometry-Based Technology and Workflows for Studying the Chemistry of Fungal Endophyte Derived Bioactive Compounds

ACS Chem Biol. 2021 Nov 1. doi: 10.1021/acschembio.1c00581. Online ahead of print.

ABSTRACT

Bioactive compounds have gained substantial attention in research and have conferred great advancements in the industrial and pharmacological fields. Highly diverse fungi and their metabolome serve as a big platform to be explored for their diverse bioactive compounds. Omics tools coupled with bioinformatics, statistical, and well-developed algorithm tools have elucidated immense knowledge about fungal endophyte derived bioactive compounds. Further, these compounds are subjected to chromatography-gas chromatography and liquid chromatography (LC), spectroscopy-nuclear magnetic resonance (NMR), and “soft ionization” technique-matrix-assisted laser desorption/ionization-time-of-flight (MALDI-TOF) based analytical techniques for structural characterization. The mass spectrometry (MS)-based approach, being highly sensitive, reproducible, and reliable, produces quick and high-profile identification. Coupling these techniques with MS has resulted in a descriptive account of the identification and quantification of fungal endophyte derived bioactive compounds. This paper emphasizes the workflows of the above-mentioned techniques, their advancement, and future directions to study the unraveled area of chemistry of fungal endophyte-derived bioactive compounds.

PMID:34724607 | DOI:10.1021/acschembio.1c00581

Categories
Nevin Manimala Statistics

Are single nucleotide polymorphisms rs7903146 and rs12255372 in transcription factor 7-like 2 gene associated with an increased risk for gestational diabetes mellitus in Egyptian women?

J Genet Eng Biotechnol. 2021 Nov 1;19(1):169. doi: 10.1186/s43141-021-00272-6.

ABSTRACT

BACKGROUND: Genetic variants in the transcription factor 7-like 2 (TCF7L2) gene are related with type 2 diabetes (T2D) and gestational diabetes mellitus (GDM) in various populations, but there are not enough statistics regarding GDM among Egyptian women. We aimed by this study to evaluate the effect of two polymorphisms of rs7903146 and rs12255372 in the TCF7L2 gene with the development of GDM among Egyptian women.

RESULTS: We enrolled 114 pregnant women with normal glucose tolerance and 114 with GDM according to the International Association of Diabetes and Pregnancy Study Groups (IADPSG) guidelines. We gathered records on blood pressure, body mass index (BMI), blood glucose level, hemoglobin A1C (HbA1c), and lipid profile. The genotyping of rs7903146 and rs12255372 polymorphisms was carried out using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP). The statistical significance of prepregnancy BMI, fasting blood sugar (FBS), HbA1c, low-density lipoprotein (LDL), and total cholesterol (Tch) was higher, P < 0.001, in GDM women in comparison to pregnant women without GDM. CT and TT genotypes in rs7903146 SNP were 46.5% vs. 54%, P <0.04, OR; CI = 1.9 (1.0 to 3.78); TT carriers were 37.7% vs. 9.6%, P <0.001, OR (CI) = 8.9 (3.7-21.1), respectively. For the TCFL2 gene rs12255372 SNP, GT carriers were 48.2% vs. 39.5%, P= 0.004, OR (CI) = 2.3 (1.3-4.2), while TT carriers were 24.6% vs. 7.9%, P < 0.001, OR (CI) = 6 (2.5-14.3).

CONCLUSION: The study showed there is a significantly higher incidence of CT/TT genotypes in rs7903146 SNP and GT/TT genotypes in rs12255372 SNP in TCF7L2 gene among GDM women in comparison to healthy pregnant women (controls).

PMID:34724590 | DOI:10.1186/s43141-021-00272-6

Categories
Nevin Manimala Statistics

Reliability of Trial Information Across Registries for Trials With Multiple Registrations: A Systematic Review

JAMA Netw Open. 2021 Nov 1;4(11):e2128898. doi: 10.1001/jamanetworkopen.2021.28898.

ABSTRACT

IMPORTANCE: Clinical trial registries are important for gaining an overview of ongoing research efforts and for deterring and identifying publication bias and selective outcome reporting. The reliability of the information in trial registries is uncertain.

OBJECTIVE: To assess the reliability of information across registries for trials with multiple registrations.

EVIDENCE REVIEW: For this systematic review, 360 protocols of randomized clinical trials (RCTs) approved by research ethics committees in Switzerland, the UK, Canada, and Germany in 2012 were evaluated. Clinical trial registries were searched from March to September 2019 for corresponding registrations of these RCTs. For RCTS that were recorded in more than 1 clinical trial registry, key trial characteristics that should be identical among all trial registries (ie, sponsor, funding source, primary outcome, target sample size, trial status, date of first patient enrollment, results available, and main publication indexed) were extracted in duplicate. Agreement between the different trial registries for these key characteristics was analyzed descriptively. Data analyses were conducted from May 1 to November 30, 2020. Representatives from clinical trial registries were interviewed to discuss the study findings between February 1 and March 31, 2021.

FINDINGS: The analysis included 197 RCTs registered in more than 1 trial registry (151 in 2 registries and 46 in 3 registries), with 188 trials in ClinicalTrials.gov, 185 in the European Union Drug Regulating Authorities Clinical Trials Database (EudraCT), 20 in ISRCTN, and 47 in other registries. The agreement of key information across all registries was as follows: 178 of 197 RCTs (90%; 95% CI, 85%-94%) for sponsor, 18 of 20 (90%; 95% CI, 68%-99%) for funding source (funding was not reported on ClinicalTrials.gov), 154 of 197 (78%; 95% CI, 72%-84%) for primary outcome, 90 of 197 (46%; 95% CI, 39%-53%) for trial status, 122 of 194 (63%; 95% CI, 56%-70%) for target sample size, and 43 of 57 (75%; 95% CI, 62%-86%) for the date of first patient enrollment when the comparison time was increased to 30 days (date of first patient enrollment was not reported on EudraCT). For results availability in trial registries, agreement was 122 of 197 RCTs (62%; 95% CI, 55%-69%) for summary data reported in the registry and 91 of 197 (46%; 95% CI, 39%-53%) for whether a published article with the main results was indexed. Different legal requirements were stated as the main reason for inconsistencies by representatives of clinical trial registries.

CONCLUSIONS AND RELEVANCE: In this systematic review, for a substantial proportion of registered RCTs, information about key trial characteristics was inconsistent across trial registries, raising concerns about the reliability of the information provided in these registries. Further harmonization across clinical trial registries may be necessary to increase their usefulness.

PMID:34724557 | DOI:10.1001/jamanetworkopen.2021.28898

Categories
Nevin Manimala Statistics

Association of Physical Activity, Including Amount and Maintenance, With All-Cause Mortality in Parkinson Disease

JAMA Neurol. 2021 Nov 1. doi: 10.1001/jamaneurol.2021.3926. Online ahead of print.

ABSTRACT

IMPORTANCE: The protective effects of physical activity (PA) against Parkinson disease (PD) development have been suggested; however, the association of PA with mortality in PD has rarely been investigated.

OBJECTIVE: To evaluate the association between PA and mortality in individuals with PD and determine how the amount and maintenance of PA are associated with mortality.

DESIGN, SETTING, AND PARTICIPANTS: This nationwide population-based cohort study used Korean National Health Insurance System data. Participants were included from January 1, 2010, and December 31, 2013, and were followed up until December 31, 2017. Data were analyzed from September 2020 to March 2021. Individuals who were newly diagnosed with PD were selected using the International Statistical Classification of Diseases and Related Health Problems, Tenth Revision code G20 and registration code V124 in the program for rare intractable diseases in 2010 through 2013. Individuals who underwent health checkups within 2 years before and after the PD diagnosis were enrolled. Those aged younger than 40 years or with missing data were excluded.

EXPOSURES: Physical activity levels were collected using self-reported questionnaires.

MAIN OUTCOMES AND MEASURES: All-cause mortality.

RESULTS: A total of 45 923 individuals were identified; 10 987 were enrolled, and 34 individuals younger than 40 years and 254 with missing data were excluded. A total of 10 699 individuals with PD were included; 4925 (46%) were male and 5774 (54%) were female, and the mean (SD) age was 69.2 (8.8) years. During the 8-year follow-up period, there were 1823 deaths (17%). The mortality rate was lower among individuals who were physically active vs inactive at all PA intensities (vigorous: hazard ratio [HR], 0.80 [95% CI, 0.69-0.93]; moderate: HR, 0.66 [95% CI, 0.55-0.78]; light: HR, 0.81 [95% CI, 0.73-0.90]). There was a significant inverse dose-response association between the total amount of PA and mortality (HRs: vigorous, 0.80 [95% CI, 0.69-0.93]; moderate, 0.66 [95% CI, 0.55-0.78]; light, 0.81 [95% CI, 0.73-0.90]; P < .001). Moreover, maintenance of PA was associated with the mortality rate. Individuals with PD who were physically active both before and after the PD diagnosis had the greatest reduction in mortality rate across all PA intensities (HRs: vigorous, 0.66 [95% CI, 0.50-0.88]; moderate, 0.49 [95% CI, 0.32-0.75]; light, 0.76 [95% CI, 0.66-0.89]). Individuals who started PA after receiving the PD diagnosis had a lower mortality rate than those who remained physically inactive (HRs: vigorous, 0.82 [95% CI, 0.70-0.97]; moderate, 0.69 [95% CI, 0.57-0.83]; light, 0.86 [95% CI, 0.78-0.98]).

CONCLUSIONS AND RELEVANCE: This analysis found a dose-response association between PA and all-cause mortality in PD. Reverse causality may exist, and future prospective randomized clinical trials are warranted to determine the effect of PA on mortality in PD.

PMID:34724534 | DOI:10.1001/jamaneurol.2021.3926

Categories
Nevin Manimala Statistics

The Association Between Medicaid Adult Dental Coverage And Children’s Oral Health

Health Aff (Millwood). 2021 Nov;40(11):1731-1739. doi: 10.1377/hlthaff.2021.01135.

ABSTRACT

Although all state Medicaid programs cover children’s dental care, Medicaid-eligible children are more likely to experience tooth decay than children in higher-income families. Using data from the 1999-2016 National Health and Nutrition Examination Survey and the 2003, 2007, and 2011-12 waves of the National Survey of Children’s Health, we examined the association between Medicaid adult dental coverage (an optional benefit) and children’s oral health. Adult dental coverage was associated with a statistically significant 5-percentage-point reduction in the prevalence of untreated caries among children after Medicaid-enrolled adults had access to coverage for at least one year. These policies were also associated with a reduction in parent-reported fair or poor child oral health with a two-year lag between the onset of the policy and the effect. Effects were concentrated among children younger than age twelve. We estimated declines in poor oral health among all racial and ethnic subgroups, although there was some evidence that non-Hispanic Black children experienced larger and more persistent effects than non-Hispanic White children. Future assessments of the costs and benefits of offering adult dental coverage may consider potential effects on the children of adult Medicaid enrollees.

PMID:34724426 | DOI:10.1377/hlthaff.2021.01135

Categories
Nevin Manimala Statistics

Comparison of D65/10° and A/10° illuminant/observer systems for colour measurement of raw pork

Acta Sci Pol Technol Aliment. 2021 Oct-Dec;20(4):485-496. doi: 10.17306/J.AFS.0971.

ABSTRACT

BACKGROUND: In pork colour measurements, the value of each parameter depends on the type of illuminant used. The spectra of D65 and A illuminants show great differences, with illuminant A having greater emission in the red part of the visible spectrum. Therefore, its application in the colour measurements of the pork longissimus muscle should result in larger changes in redness (&Delta;a*) and hue angle (&Delta;h&deg;) and higher correlation between &Delta;a* and &Delta;h&deg; and pH48 and WHC. The purpose of this study was to compare the suitability of the illuminant/observer systems D65/10&deg; and A/10&deg; for colour measurements of pork longissimus muscle, using the CIELAB and CIELCh systems.

METHODS: The study involved 168 samples of longissimus lumborum muscle taken from 168 carcasses (mean weight 90.2 &plusmn;6.0 kg) of pigs slaughtered on an industrial processing line. The moisture content, crude protein, intramuscular fat content, WHC, and pH48 were determined. Colour measurements using CIELAB and CIELCh scales were carried out with both D65/10&deg; and A/10&deg; illuminant/observer systems and reflectance measurements. The chromatic absorbance value at 525 nm (A525p) and the relative amounts of MbO2, MetMb, and Mb were calculated according to methods proposed by Krzywicki (1979) and AMSA (2012). Meat samples were illuminated and differences in the values of colour parameters (&Delta;L*, &Delta;a*, &Delta;b*, &Delta;C*, &Delta;h&deg;), chromatic absorbance at 525 nm (&Delta;A525p), and in the relative amounts of chemical forms of myoglobin (&Delta;MbO2, &Delta;MetMb, &Delta;Mb) were determined. In addition, hue difference (&Delta;H) and total difference (&Delta;E) were calculated.

RESULTS: The values of correlation coefficients between moisture content (especially crude protein and intramuscular fat, and colour parameters) were low and often statistically insignificant. Higher and mostly significant values of correlation coefficients were found between colour parameters and WHC and pH48. The A/10&deg; system resulted in higher values of correlation coefficients than D65/10&deg; between (I) WHC, pH48 and (II) h&deg;, &Delta;a* and &Delta;h&deg;. At the same time, in the A/10&deg; system the combined effect of the relative amounts of myoglobin chemical forms on the variation of h&deg; values and the combined effect of changes (&Delta;) in their amounts on the variation of &Delta;h&deg; and &Delta;H and &Delta;E were greater than in D65/10&deg;, with the greatest effect of these changes (&Delta;) in the amount of MetMb.

CONCLUSIONS: Replacement of the illuminant/observer D65/10&deg; system with the A/10&deg; system in colour measurements of raw pork longissimus muscle changed the proportion of pigments and the relative number of chemical forms of myoglobin in influencing the values of colour parameters, primarily h&deg;. Therefore, using the A/10&deg; system for colour measurements allows us to better capture the differences (&Delta;) in redness &Delta;a* and especially in hue angle (&Delta;h&deg;), as well as hue difference (&Delta;H) and total difference (&Delta;E), with an increase in the relative amount of MetMb becoming the main determinant of these differences (&Delta;). At the same time, measurements using the A/10&deg; system increased the correlation coefficients between WHC and pH48 and changes in redness (&Delta;a*) and hue angle (&Delta;h&deg;). Therefore, the A/10&deg; system compared to the D65/10&deg; system may be more useful for measuring the colour stability of raw pork, especially the determination of &Delta;h&deg; and &Delta;H and &Delta;E. >.

PMID:34724372 | DOI:10.17306/J.AFS.0971

Categories
Nevin Manimala Statistics

Antioxidant and antimicrobial activities of fruit extracts from different fresh chili peppers

Acta Sci Pol Technol Aliment. 2021 Oct-Dec;20(4):465-472. doi: 10.17306/J.AFS.0977.

ABSTRACT

BACKGROUND: The aim of the current study was to assess the antimicrobial and antioxidant potential of ethanol extracts obtained from the fruit of five species of fresh chili pepper, Capsicum (C.) baccatum L. (Aji Amarillo), C. chinense (Fidalgo Roxa), C. annuum (Cherry Chocolate), C. pubescens (Rocoto Orange) and C. frutescens (Peruvian Purple).

METHODS: To obtain the ethanol extracts, accelerated solvent extraction (ASE) was applied. DPPH assay was used to determine the antioxidant activity of the extract samples. The disc diffusion method was used to measure antimicrobial activity against nine investigated microorganism species.

RESULTS: The tested extract samples exhibited DPPH radical scavenging activities ranging from 0.24 &plusmn;0.01 (Peruvian Purple) to 0.72 &plusmn;0.02 (Aji Amarillo) mg TEAC∙g&ndash;1 dw. The differences between all the varieties were statistically significant (P < 0.05; except for the Cherry Chocolate and Rocoto Orange), and the potential of antioxidant capacity increased in the following manner: Peruvian Purple < Fidalgo Roxa < Rocoto Orange < Cherry Chocolate < Aji Amarillo. The results from the antimicrobial evaluation showed that the Capsicum extracts had no uniform inhibition activity against tested gram-negative, gram-positive bacteria, and yeast. Specifically, Aji Amarillo fruit extract revealed the strongest antimicrobial activity against S. pneumoniae (6.33 &plusmn;0.58 mm), followed by Cherry Chocolate against S. pneumoniae (5.33 &plusmn;0.58 mm), Rocoto Orange against S. enterica (5.27 &plusmn;0.58 mm), Fidalgo Roxa against C. albicans (4.67 &plusmn;0.58 mm), and Peruvian Purple against S. pneumoniae (4.57 &plusmn;0.58 mm).

CONCLUSIONS: Considering these results, Capsicum spp. can be used as a source of novel antioxidant and antimicrobial compounds.

PMID:34724370 | DOI:10.17306/J.AFS.0977

Categories
Nevin Manimala Statistics

Optimization of carrot fermentation conditions in rice bran bed using Lactobacillus plantarum

Acta Sci Pol Technol Aliment. 2021 Oct-Dec;20(4):449-457. doi: 10.17306/J.AFS.0944.

ABSTRACT

BACKGROUND: A statistical model was developed in this study to describe lactic acid production through a fermentation process of carrot in a rice bran bed by Lactobacillus plantarum.

METHODS: Response surface methodology (RSM) based on Box-Behnken design was employed to statistically evaluate and optimize the conditions for maximum lactic acid production.

RESULTS: The significance and interaction of salt concentration, water and initial L. plantarum starter density on final lactic acid content were found. With the use of the developed quadratic model equation, a maximum achieved lactic acid content of 1.35% was obtained in a rice bran bed fermentation process at optimum operating conditions of approximately 2.95% salt, 48.24% water and 2.9 log cfu/g of L. plantarum. After fermentation, the amount of total polyphenol content, antioxidant activity and carbohydrate had increased while the &beta;-carotene in carrot was significantly retained (92.84%).

CONCLUSIONS: The above results could provide a practical basis for the fermentation process in rice bran bed to produce a delicious and reliable product using L. plantarum strain XK 1.4 which could be a significant contribution to the food industry.

PMID:34724368 | DOI:10.17306/J.AFS.0944

Categories
Nevin Manimala Statistics

Dietary supplements in hypothyroidism

Acta Sci Pol Technol Aliment. 2021 Oct-Dec;20(4):375-381. doi: 10.17306/J.AFS.0985.

ABSTRACT

BACKGROUND: According to Statistics Poland (GUS, 2021), 15.8% of women and 2.5% of men suffer from thyroid disease. Although pharmacotherapy is the primary treatment, there is evidence that some vitamins and minerals can alleviate the symptoms of thyroid disease. A well-balanced and varied diet should cover the individual demand for energy and all necessary nutrients. However, dietary supplements are prevalent in Poland. This study aims to evaluate the frequency and reasons behind dietary supplementation in patients with hypothyroid diseases.

METHODS: 232 volunteers (203 women and 29 men) from Poland participated in the research. The research was conducted using a questionnaire. Participants were asked to provide information on their diagnosis, clinical manifestations of the disease, their lifestyles, and the use of dietary supplements with the effect on their health.

RESULTS: The medium age of participants was 27 years. Of them, 85% took dietary supplements. The most popular were vitamin D, magnesium, omega-3 acids, selenium, multivitamins, vitamins B, iron, vitamin C, and zinc. In addition, 53% of patients implemented lifestyle changes after a diagnosis of hypothyroidism. There was a correlation between the participants&rsquo; age and the willingness to introduce lifestyles modifications: the younger the participants were, the eager they were to introduce modifications (r = &minus;0.243, p = 0.010, 95% CI: &minus;0.410 to &minus;0.060). In addition, there was a correlation between the participants&rsquo; age and the willingness to change their diets: the older the participants were, the more eager they were to change diets (r = 0.283, p = 0.003, 95% CI: 0.103&ndash;0.445). Patients indicated numerous health benefits of using dietary supplements. The vitamin D and vitamin and mineral complexes were indicated as the most beneficial.

CONCLUSIONS: Dietary supplementation is prevalent in Poland, especially among hypothyroidism patients. Patients take a variety of supplements, claiming that they improve the condition of their skin, nails, memory, and others, which may be controversial. Therefore, it seems advisable to deepen the patients&rsquo; supplementation knowledge (via contact with a physician, dietitian, etc.). Furthermore, reliable guidelines on&nbsp; supplementation for hypothyroidism patients based on clinical trials should be developed.

PMID:34724363 | DOI:10.17306/J.AFS.0985