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Nevin Manimala Statistics

Comparisons of Interapical Distance and Coronal Balance Measurements among Standing Positions in Participants with and without Adolescent Idiopathic Scoliosis Using 3D Ultrasound Imaging

Spine (Phila Pa 1976). 2025 Feb 6. doi: 10.1097/BRS.0000000000005284. Online ahead of print.

ABSTRACT

STUDY DESIGN: Cross-sectional study.

OBJECTIVE: The objective of this study was to quantify whether interapical distance and coronal balance measured on 3D ultrasound (3DUS) images differed among ten standing positions of participants with and without adolescent idiopathic scoliosis (AIS).

SUMMARY OF BACKGROUND DATA: Apical vertebral translation (AVT) is an indicator of clinical symptoms and treatment outcomes in AIS. Stereo-radiography simultaneously captures a frontal and lateral image, yet patients are required to elevate their arms during the examination and varied positioning may impact coronal plane measurements. Ultrasound can assess these measurements without exposing participants to radiation.

METHODS: Females with and without AIS were recruited from a scoliosis clinic, and email advertisements, respectively. Participants underwent 3DUS scans in ten positions: standing; arms anteriorly supported in 60° of shoulder flexion; fingers to clavicles, chin, zygomatic processes, and eyebrows; shoulders abducted at 90° with hands open and thumbs on shoulders; hands on anterior wall with and without blocks; and hands unsupported. AVT and coronal balance measurements were obtained using custom software. Positions and groups were compared using repeated measures ANOVAs with Sidak pairwise comparisons.

RESULTS: Fifty-nine females had a mean age, height, and weight of 17.5±4.9 years, 162.8±5.8 cm, and 56.2±10.6 kg, respectively. Seventeen single and 14 double curve participants were included with mean maximum curve angles of 26.4°±3.6° and 25.2°±3.1°, respectively. Overall, there were no statistically significant differences in interapical distance or coronal balance among the ten positions, as well as in coronal balance between the groups (P>0.05). The interapical distance of participants without AIS significantly differed from those with single curves in eight positions and from those with double curves in all ten positions.

CONCLUSIONS: The positions evaluated may be interchangeable for coronal plane lateral deviation measurements of females with AIS.

PMID:39912326 | DOI:10.1097/BRS.0000000000005284

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Nevin Manimala Statistics

A Comparative Analysis of Three Large Language Models on Bruxism Knowledge

J Oral Rehabil. 2025 Feb 6. doi: 10.1111/joor.13948. Online ahead of print.

ABSTRACT

BACKGROUND: Artificial Intelligence (AI) has been widely used in health research, but the effectiveness of large language models (LLMs) in providing accurate information on bruxism has not yet been evaluated.

OBJECTIVES: To assess the readability, accuracy and consistency of three LLMs in responding to frequently asked questions about bruxism.

METHODS: This cross-sectional observational study utilised the Google Trends tool to identify the 10 most frequent topics about bruxism. Thirty frequently asked questions were selected, which were submitted to ChatGPT-3.5, ChatGPT-4 and Gemini at two different times (T1 and T2). The readability was measured using the Flesch Reading Ease (FRE) and Flesch-Kincaid Grade Level (FKG) metrics. The responses were evaluated for accuracy using a three-point scale, and consistency was verified by comparing responses between T1 and T2. Statistical analysis included ANOVA, chi-squared tests and Cohen’s kappa coefficient considering a p value of 0.5.

RESULTS: In terms of readability, there was no difference in FRE. The Gemini model showed lower FKG scores than the Generative Pretrained Transformer (GPT)-3.5 and GPT-4 models. The average accuracy of the responses was 68.33% for GPT-3.5, 65% for GPT-4 and 55% for Gemini, with no significant differences between the models (p = 0.290). Consistency was substantial for all models, with the highest being in GPT-3.5 (95%). The three LLMs demonstrated substantial agreement between T1 and T2.

CONCLUSION: Gemini’s responses were potentially more accessible to a broader patient population. LLMs demonstrated substantial consistency and moderate accuracy, indicating that these tools should not replace professional dental guidance.

PMID:39912320 | DOI:10.1111/joor.13948

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Nevin Manimala Statistics

Subfoveal choroidal thickness in pregnancy: A systematic review with meta-analyses

Acta Ophthalmol. 2025 Feb 6. doi: 10.1111/aos.17459. Online ahead of print.

ABSTRACT

Pregnancy induces a variety of changes in the eye. Mapping these changes provides a pathophysiological basis for understanding pregnancy-associated ocular disorders. In this systematic review and meta-analysis, our aim was to determine how pregnancy affects subfoveal choroidal thickness and to explore temporal changes in subfoveal choroidal thickness during pregnancy and postpartum. On April 7, 2024, we searched eight literature databases for studies which used macular optical coherence tomography to evaluate subfoveal choroidal thickness in healthy pregnant women. We identified 26 studies summarizing data from 1935 healthy women, of which 1096 were pregnant and 839 non-pregnant. We found that pregnant women had a subfoveal choroidal thickness which was 31.1 μm (95% CI: 19.4-42.7 μm) thicker than non-pregnant women. No statistically significant changes were observed throughout trimesters. From the 3rd trimester to postpartum, we found a reduction in the subfoveal choroidal thickness at -41.9 μm (95% CI: -68.5 to -15.2 μm). In conclusion, in healthy women without ocular disease, pregnancy is associated with a thicker subfoveal choroid indicating a higher choroidal perfusion. Choroidal thickness remains stable across trimesters and is reduced postpartum, indicating a temporary physiological adaptation during pregnancy.

PMID:39912315 | DOI:10.1111/aos.17459

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Nevin Manimala Statistics

Safety and Efficacy of Neuroprotective Agents as Adjunctive Therapies for Reperfusion in the Treatment of Acute Ischemic Stroke: A Systematic Review and Meta-analysis of Randomized Controlled Trials

J Neurosurg Anesthesiol. 2025 Feb 6. doi: 10.1097/ANA.0000000000001029. Online ahead of print.

ABSTRACT

There is still no clear evidence of the efficacy of the application of neuroprotective agents (NPAs) for acute ischemic stroke (AIS) patients receiving reperfusion therapies. This meta-analysis aimed to determine the effects of NPAs versus placebo on functional and safety outcomes as an adjunctive treatment to intravenous thrombolysis (IVT) or endovascular therapy (EVT) in AIS patients. The primary outcome was neurological functional independence, as evaluated by the proportion of patients whose modified Rankin Scale scores were 0 to 2 at 90 days after treatment. Thirteen randomized controlled trials with a total of 3736 patients were included. The application of NPAs was associated with greater odds of functional independence (odds ratio [OR]: 1.28; 95% CI: 1.12 to 1.46; P < 0.001; I2 = 0.0%) within 90 days. However, subgroup analysis of reperfusion therapy type (IVT, EVT, or both) revealed that only the EVT subgroup showed a significant association between NPAs or placebo and functional independence at 90 days (EVT group, OR: 1.43; 95% CI: 1.05 to 1.94; P = 0.022; I2 = 0.0%; IVT group, OR: 1.51; 95% CI: 0.93 to 2.46; P = 0.099; I2 = 39.8%; IVT plus EVT group, OR: 1.17; 95% CI: 0.94 to 1.45; P = 0.157; I2 = 16.0%). This meta-analysis revealed that NPAs could increase the possibility of AIS patients undergoing reperfusion therapies achieving functional independence within 90 days of onset; however, with the limited number of studies on each drug, further evidence is still needed to demonstrate the efficacy of each individual agent as an adjunctive therapy for different means of reperfusion.

PMID:39912307 | DOI:10.1097/ANA.0000000000001029

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Nevin Manimala Statistics

scRecover: Discriminating True and False Zeros in Single-Cell RNA-Seq Data for Imputation

Stat Med. 2025 Feb 28;44(5):e10334. doi: 10.1002/sim.10334.

ABSTRACT

High-throughput single-cell RNA-seq (scRNA-seq) data contains an excess of zero values, which can be contributed by unexpressed genes and detection signal dropouts. Existing imputation methods fail to distinguish between these two types of zeros. In this study, we introduce a statistical framework that effectively differentiates true zeros (lack of expression) from false zeros (dropouts). By focusing only on imputing the dropout zeros, we developed a new imputation tool, scRecover. Our approach utilizes a zero-inflated negative binomial framework to model the gene expression of each gene in each cell, enabling the estimation of zero-dropout probability. Additionally, we employ a modified version of the Good and Toulmin model to identify true zeros for each gene. To achieve imputation, scRecover is combined with other imputation methods such as scImpute, SAVER and MAGIC. Down-sampling experiments show that it recovers dropout zeros with higher accuracy and avoids over-imputing true zero values. Experiments conducted on real world data highlight the ability of scRecover to enhance downstream analysis and visualization.

PMID:39912305 | DOI:10.1002/sim.10334

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Nevin Manimala Statistics

Utility of Digital Phenotyping Based on Wrist Wearables and Smartphones in Psychosis: Observational Study

JMIR Mhealth Uhealth. 2025 Feb 5;13:e56185. doi: 10.2196/56185.

ABSTRACT

BACKGROUND: Digital phenotyping provides insights into an individual’s digital behaviors and has potential clinical utility.

OBJECTIVE: In this observational study, we explored digital biomarkers collected from wrist-wearable devices and smartphones and their associations with clinical symptoms and functioning in patients with schizophrenia.

METHODS: We recruited 100 outpatients with schizophrenia spectrum disorder, and we collected various digital data from commercially available wrist wearables and smartphones over a 6-month period. In this report, we analyzed the first week of digital data on heart rate, sleep, and physical activity from the wrist wearables and travel distance, sociability, touchscreen tapping speed, and screen time from the smartphones. We analyzed the relationships between these digital measures and patient baseline measurements of clinical symptoms assessed with the Positive and Negative Syndrome Scale, Brief Negative Symptoms Scale, and Calgary Depression Scale for Schizophrenia, as well as functioning as assessed with the Social and Occupational Functioning Assessment Scale. Linear regression was performed for each digital and clinical measure independently, with the digital measures being treated as predictors.

RESULTS: Digital data were successfully collected from both the wearables and smartphones throughout the study, with 91% of the total possible data successfully collected from the wearables and 82% from the smartphones during the first week of the trial-the period under analysis in this report. Among the clinical outcomes, negative symptoms were associated with the greatest number of digital measures (10 of the 12 studied here), followed by overall measures of psychopathology symptoms, functioning, and positive symptoms, which were each associated with at least 3 digital measures. Cognition and cognitive/disorganization symptoms were each associated with 1 or 2 digital measures.

CONCLUSIONS: We found significant associations between nearly all digital measures and a wide range of symptoms and functioning in a community sample of individuals with schizophrenia. These findings provide insights into the digital behaviors of individuals with schizophrenia and highlight the potential of using commercially available wrist wearables and smartphones for passive monitoring in schizophrenia.

PMID:39912304 | DOI:10.2196/56185

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Nevin Manimala Statistics

Determinants of Periodic Health Examination Uptake: Insights From a Jordanian Cross-Sectional Study

JMIRx Med. 2025 Feb 5;6:e57597. doi: 10.2196/57597.

ABSTRACT

BACKGROUND: Routine periodic health examinations (PHEs) for adults who are asymptomatic are included in clinical preventive services. They aim to prevent morbidity and mortality by identifying modifiable risk factors and early signs of treatable diseases. PHEs are a standard procedure in primary health care worldwide, including in Jordan. The country is undergoing an epidemiological transition toward noncommunicable diseases, which are the leading causes of morbidity and mortality. The prevalence of smoking is among the highest in the world, with escalating rates of obesity and physical inactivity. Notably, hypertension and diabetes are the most prevalent diseases.

OBJECTIVE: This study aims to determine the extent to which individuals in Jordan participate in PHEs and to evaluate the various factors related to sociodemographics, health, knowledge, and behavior that influence this participation.

METHODS: This study used a cross-sectional design and includes 362 participants 18 years or older residing in Jordan. A convenience sampling method was used, and data were collected through a hybrid web-based and face-to-face questionnaire. The analysis involved the application of logistic regression through SPSS to investigate the relationship between various influencing factors and the uptake of PHEs.

RESULTS: Our study indicated that only 98 of the 362 (27.1%, 95% CI 22.8%-31.9%) participants underwent PHEs within the last 2 years. Noteworthy predictors of PHE uptake among Jordanians included recent visits to a primary health care facility within the previous year (adjusted odds ratio [AOR] 4.32, 95% CI 2.40-7.76; P<.001), monthly income (P=.02; individuals with a monthly income of 1500-2000 JD displayed more than five times the odds of undertaking PHEs than those with a monthly income <500 JD; AOR 5.74, 95% CI 1.32-24.90; P=.02; those with a monthly income of more than 2000 JD exhibited even higher odds; AOR 9.81, 95% CI 1.73-55.55; P=.02; a currency exchange rate of 1 JD=US $1.43 is applicable), and knowledge levels regarding PHEs and preventive health measures (AOR 1.23, 95% CI 1.03-1.47; P=.007). These variables emerged as the strongest predictors in our analysis, shedding light on key factors influencing PHE uptake in the population. Contrary to other research, our study did not find any statistically significant association between gender (P=.33), smoking status (P=.76), marital status (P=.52), health status self-evaluation (P=.18), seasonal influenza vaccination (P=.07), combined health behavior factors (P=.34), and BMI (P=.76) and PHE uptake.

CONCLUSIONS: PHE uptake is notably low in Jordan. Critical determinants of this uptake include recent visits to a primary health care facility within the previous year, monthly income, and knowledge levels regarding PHEs and preventive health services. To enhance PHE uptake, there is a critical need to integrate PHEs with primary health care services, increase awareness about PHEs, and offer free preventive services, particularly for those at high risk.

PMID:39912301 | DOI:10.2196/57597

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Nevin Manimala Statistics

Comparing In-Person, Standard Telehealth, and Remote Musculoskeletal Examination With a Novel Augmented Reality Exercise Game System: Pilot Cross-Sectional Comparison Study

JMIR Serious Games. 2025 Feb 5;13:e57443. doi: 10.2196/57443.

ABSTRACT

BACKGROUND: Current telemedicine technologies are not fully optimized for conducting physical examinations. The Virtual Remote Tele-Physical Examination (VIRTEPEX) system, a novel proprietary technology platform using a Microsoft Kinect-based augmented reality game system to track motion and estimate force, has the potential to assist with conducting asynchronous, remote musculoskeletal examinations.

OBJECTIVE: This pilot study evaluated the feasibility of the VIRTEPEX system as a supplement to telehealth musculoskeletal strength assessments.

METHODS: In this cross-sectional pilot study, 12 study participants with upper extremity pain and/or weakness underwent strength evaluations for four upper extremity movements using in-person, telehealth, VIRTEPEX, and composite (telehealth plus VIRTEPEX) assessments. The evaluators were blinded to each other’s assessments. The primary outcome was feasibility, as determined by participant recruitment, study completion, and safety. The secondary outcome was preliminary evaluation of inter-rater agreement between in-person, telehealth, and VIRTEPEX strength assessments, including κ statistics.

RESULTS: This pilot study had an 80% recruitment rate, a 100% completion rate, and reported no adverse events. In-person and telehealth evaluations achieved highest overall agreement (85.71%), followed by agreements between in-person and composite (75%), in-person and VIRTEPEX (62.5%), and telehealth and VIRTEPEX (62.5%) evaluations. However, for shoulder flexion, agreement between in-person and VIRTEPEX evaluations (78.57%; κ=0.571, 95% CI 0.183 to 0.960) and in-person and composite evaluations (78.57%; κ=0.571, 95% CI 0.183 to 0.960) was higher than that between in-person and telehealth evaluations (71.43%; κ=0.429, 95% CI -0.025 to 0.882).

CONCLUSIONS: This study demonstrates the feasibility of asynchronous VIRTEPEX examinations and supports the potential for VIRTEPEX to supplement and add value to standard telehealth platforms. Further studies with an additional development of VIRTEPEX and larger sample sizes for adequate power are warranted.

PMID:39912298 | DOI:10.2196/57443

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Nevin Manimala Statistics

Optimal Control of Directional False Discovery Rates in Large-Scale Testing

Stat Med. 2025 Feb 28;44(5):e10329. doi: 10.1002/sim.10329.

ABSTRACT

The high-throughput biomedical technology enables measurement of thousands of gene expression levels contemporaneously. A major task in analyzing these gene expression data is to identify both over-expressed and under-expressed genes. The popular two-group models select the non-null genes without further classifying them as overexpression or underexpression. Consequently, two-group decision rules are unable to constrain the numbers of falsely discovered over-expressed or under-expressed genes respectively. We propose a general three-group model that allows dependence between the test statistics and develop a decision rule that separately controls the two types of false discoveries. We show that the optimal decision rule in our three-group model has a special monotonic structure. By making use of this monotonic structure, we can linearize the two-directional false discovery rate constraints. We prove that our decision rule optimizes the expected number of true discoveries while controlling the proportions of falsely discovered over-expressed and under-expressed genes at desired levels simultaneously. The data-driven versions of the proposed procedures are suggested, and their consistency is established. Comparisons with state-of-the-art approaches and applications to genomic studies show that our procedures work well.

PMID:39912293 | DOI:10.1002/sim.10329

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Nevin Manimala Statistics

Exploration of the covariation signal between cortical bone and dentine volumes across the upper limb bones and anterior teeth in modern humans and relevance to evolutionary anthropology

J Anat. 2025 Feb 6. doi: 10.1111/joa.14227. Online ahead of print.

ABSTRACT

Cortical bone and dentine are two mineralized tissues sharing a common embryological origin, developmental, and genetic background, distinct from those of enamel. Understanding their relationship is crucial to decipher the factors acting on their postnatal development, and shedding light on the evolutionary patterns of tissue proportions. Here, we investigate the coordinated variation between cortical bone and dentine volumes measured from arm and forearm bones (humeri, ulnae, radii) and upper anterior teeth (central incisors, lateral incisors, canines) of modern humans. Given the shared characteristics of cortical bone and dentine, we expect similarities in their postnatal development, which may lead to covariation between their volumes. The degree of bone-dentine covariation may be influenced by the physiological response of upper limb bones to mechanical loading. No such covariation is expected with enamel volumes, due to the greater developmental independence of bone and enamel. Our sample includes 55 adults of African and European ancestries from South African osteological collections. Principal component analysis of cortical thickness variation along the shafts of paired humeri, ulnae, and radii is used to assess asymmetry. Bone regions with bilateral asymmetry in cortical bone thickness are considered sensitive to functional loads, while regions with minimal bilateral variation likely reflect genetic influences during bone postnatal development. Statistical analyses reveal strong positive correlations between cortical bone and dentine volumes across all bones and teeth, and weaker correlations between cortical bone and enamel. We outline a complex pattern of bone-dentine covariation that varies by skeletal location and tooth type. Contrary to our expectations, the presumed functional sensitivity of bone regions does not influence the covariation signal. Additionally, the strength of the covariation appears to align with the developmental sequence of the anterior teeth, with the upper canines showing the strongest correlation with cortical bone volumes, followed by lateral and central incisors. These results provide insights into the functional and biological factors influencing the coordinated variation of cortical bone and dentine volumes during postnatal development. Further research on the cortical bone-dentine covariation across different skeletal parts, including lower limb elements, would enhance our understanding of the effects of both endogenous and exogenous factors on the development of the mineralized tissues.

PMID:39912285 | DOI:10.1111/joa.14227