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Nevin Manimala Statistics

Liver Cancer Mortality Rates in Peru: Trend Analysis from 2003 to 2017

Asian Pac J Cancer Prev. 2025 Feb 1;26(2):435-441. doi: 10.31557/APJCP.2025.26.2.435.

ABSTRACT

BACKGROUND: Liver cancer is one of the leading causes of cancer-related death in Peru, and some reports have indicated an increase in mortality rates among the largest cities. To our knowledge, no study has been carried out at a national level or by geographic area in recent years. Thus, our objective was to examine overall, regional and sex-specific liver cancer mortality rates in Peru between 2003-2017.

METHODS: We retrieved data on liver cancer deaths between 2003 and 2017 from the mortality database of the Peruvian Ministry of Health. Age-standardized mortality rates (ASMR) were estimated per 100,000 person-years using the world standard SEGI population. We analyzed mortality trends using Joinpoint regression Program Version 4.7.0. To examine the spatial distribution of the mortality rates, we used GeoDa software.

RESULTS: Between 2003 and 2017, 31,473 deaths from liver cancer were reported in Peru. Overall, liver cancer mortality rates have decreased significantly among Peruvian women since 2005 (-3.1% annually) with decreases in the coastal and highland regions ranging from 2.8% to 3.5%. In Arequipa, Cusco, La Libertad, Lima, and Moquegua, rates decreased bewteen 2003 and 2017. Among men in Ancash a significant increase (+12.5 annually) was observed from 2003-2011, followed by a sharpdecline (-10.5 annually) between 2011 and 2017. In contrast, rates in Cajamarca, Junin, and Ucayali decreased between 2003 and 2017.

CONCLUSIONS: Although decreases in liver cancer mortality rates were observed in some regions of Peru, these trends were not statistically significant. In addition, some provinces experienced increases in rates. Effective interventions, such as expanding access to healthcare and controlling the various risk factors for liver cancer, remains a key challenge for the country.

PMID:40022687 | DOI:10.31557/APJCP.2025.26.2.435

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Nevin Manimala Statistics

Different Immunohistochemical Expression of CTLA-4 in Diffuse Large B-Cell Lymphoma and Its Associated Prognostic Factors

Asian Pac J Cancer Prev. 2025 Feb 1;26(2):405-410. doi: 10.31557/APJCP.2025.26.2.405.

ABSTRACT

BACKGROUND: Diffuse large B-cell lymphoma (DLBCL) is classified into germinal center B-cell-like (GCB) and non-GCB subtypes. This study aimed to evaluate the immunohistochemical expression of CTLA-4 in these subtypes and its association with prognostic factors.

METHODS: This retrospective study analyzed 50 cases of DLBCL. Clinical and histopathological data were collected, and CTLA-4 expression was assessed using immunohistochemistry. Statistical significance was determined using an unpaired t-test.

RESULT: The average CTLA-4 expression in DLBCL was 50.46 cells per high-power field. Higher CTLA-4 expression was observed in the non-GCB subtype, patients younger than 60 years, females, those with stage III-IV disease, involvement of more than one extranodal site, and a low International Prognostic Index (IPI) score (0-2). A significant association was found between CTLA-4 expression and age (p = 0.045, 95% CI: 44.67-75.86).

CONCLUSION: CTLA-4 expression was present in the tumor microenvironment of DLBCL. Higher expression was significantly associated with patients younger than 60 years.

PMID:40022684 | DOI:10.31557/APJCP.2025.26.2.405

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Nevin Manimala Statistics

Cytochrome P450 17 (CYP17), CYP2C19*2, CYP2C19*3 Gene Polymorphisms and Gastrointestinal Cancer Risk in Rural Maharashtra: A Hospital based Case-Control Study

Asian Pac J Cancer Prev. 2025 Feb 1;26(2):391-398. doi: 10.31557/APJCP.2025.26.2.391.

ABSTRACT

BACKGROUND: Gastrointestinal cancer (GI) is one of the most common cancer worldwide rapidly increasing in India too. Cytochrome P450 (CYP) family comprise a group of phase I metabolizing enzymes which are important in xenobiotics and carcinogen metabolism. Several studies revealed the association of metabolic genes with risk of cancers, but the results were ambiguous to support the evidences in case of GI cancer risk. These differences in earlier studies directed us to review the association of polymorphisms of metabolic genes including CYP17 and CYP2C19 (CYP2C19*2, CYP2C19*3) with GI cancer susceptibility in rural population of Maharashtra.

METHODS: Genetic polymorphism of CYP17 and CYP2C19 (CYP2C19*2, CYP2C19*3) genes among two hundred histologically confirmed gastrointestinal cancer cases and equal number of age and sex matched controls was studied by polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) method. The Odds ratio (OR) with 95% confidence interval and p-value were evaluated to get the level of association of polymorphisms with risk of GI cancer, where p ≤0.05 was considered as statistically significant.

RESULTS: After the regression analysis the results of genetic polymorphisms of CYP17 and CYP2C19 showed significant deviation from Hardy-Weinberg equilibrium for variant genotype of CYP2C19*2 (rs4244285) (OR=3.37 95% CI: 1.74-6.53; p=0.0003) which indicated functional association of CYP2C19*2 with GI cancer risk in the studied population. Similarly when we studied the association of CYP2C19*3 and CYP17 polymorphism, the variant genotypes did not show association with development of GI cancer among rural population of south-western Maharashtra.

CONCLUSION: The findings obtained from this study signified evident association of rs4244285 SNP of CYP2C19*2 with GI cancer risk in the studied rural population.

PMID:40022682 | DOI:10.31557/APJCP.2025.26.2.391

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Nevin Manimala Statistics

Maternal Alcohol Consumption and Risk of Childhood Cancers: A Systematic Review and Meta-Analysis

Asian Pac J Cancer Prev. 2025 Feb 1;26(2):361-369. doi: 10.31557/APJCP.2025.26.2.361.

ABSTRACT

BACKGROUND: Childhood cancers are a leading cause of death among children worldwide. Maternal alcohol consumption before and during pregnancy has been suggested as a potential risk factor for childhood cancers. However, the evidence to support this association is inconsistent. A systematic review and meta-analysis were conducted to clarify this association.

METHODS: We performed a systematic search of PubMed, Web of Science, and Scopus databases until May 2023 to identify observational studies reporting associations between maternal alcohol consumption and childhood cancers. Heterogeneity between studies was evaluated using the χ2, τ2, and I2 statistics. Publication bias was assessed using Begg and Egger tests. We calculated the odds ratio (OR) with a 95% confidence interval (CI) using a random-effects model.

RESULTS: Out of 18,583 studies retrieved from the search, 31 studies involving 47,277 participants met the eligibility criteria. Our meta-analysis found that maternal alcohol consumption before and during pregnancy was associated with an increased risk of childhood cancers with OR of 1.15 (95% CI: 1.00, 1.33) and 1.11 (95% CI: 1.03, 1.20), respectively.

CONCLUSIONS: Our meta-analysis found evidence of a positive association between maternal alcohol consumption before and during pregnancy and the risk of childhood cancers. These findings suggest a need for public health interventions aimed at reducing alcohol consumption during pregnancy to potentially prevent childhood cancers.

PMID:40022678 | DOI:10.31557/APJCP.2025.26.2.361

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Nevin Manimala Statistics

Risk factors influencing fall risk in geriatric patients with type 2 diabetes: a comprehensive analysis

Aging Male. 2025 Dec;28(1):2469614. doi: 10.1080/13685538.2025.2469614. Epub 2025 Mar 1.

ABSTRACT

BACKGROUND AND OBJECTIVES: Type 2 diabetes mellitus (T2DM) is a common chronic disease in the elderly. Comorbidities, especially neuropathy and retinopathy, significantly increase fall risk in this group. This study aimed to identify fall risk factors in older adults with T2DM.

MATERIALS AND METHODS: From January to June 2024, 242 T2DM patients aged 65 and older were followed at the internal medicine outpatient clinic. Fall risk was assessed using the Performance Oriented Mobility Assessment (POMA), Hendrich II Fall Risk Model (HIIFRM), Barthel Activities of Daily Living Index, and Clinical Frailty Scale (CFS).

RESULTS: Among the patients (median age = 70 years), 41.3% had experienced at least one fall in the previous year. Factors, such as age and diabetes duration were associated with falls. Notably, hypoglycemia (aPR: 1.90, p = 0.017), polypharmacy (aPR: 2.39, p = 0.004), osteoarthritis (aPR: 2.48, p = 0.017), (aPR: 1.70, p = 0.025), and malnutrition (aPR: 1.90, p = 0.007) were independently associated with fall risk.

CONCLUSIONS: Fall risk in elderly outpatients with T2DM was linked to various factors, including hospitalization, malnutrition, osteoarthritis, polypharmacy, neuropathy, and hypoglycemia. To mitigate this risk, patient-specific care plans are recommended.

PMID:40022664 | DOI:10.1080/13685538.2025.2469614

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Nevin Manimala Statistics

Incidence of healthcare-associated infections in 2023 at the Haguenau Hospital Centre

Ann Biol Clin (Paris). 2025 Feb 1;83(1):9-19. doi: 10.1684/abc.2025.1943.

ABSTRACT

Nosocomial infections (NI) are a major concern of healthcare professionals. To propose targeted awareness-raising campaigns, we put in place NI monitoring of laboratory data. The positive bacteriological results after 48 hours hospitalisation are subject of a report via the Infection Control Team, to the physician corresponding in the department, for the clinical validation of diagnostic of NI. At hospital level and specialty activity, we measured NI incidence rates for 1 000 hospital days and for 100 admissions every month since October 1, 2016. Results were then declined by specialties and by infected anatomical site and investigation allowed to describe the microbial flora responsible for these infections. The request began in october 2016. Average results were stable over the year despite monthly fluctuations. For 2023, incidence rates are IAS 2,8 for 1 000 JH and IAS 1,2 for 100 admissions. The detail of the results is transmitted to the physicians and is the subject of internal communications. They will be allowed to follow up more closely with the NI epidemiology and propose targeted corrective measures as appropriate.

PMID:40022632 | DOI:10.1684/abc.2025.1943

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Nevin Manimala Statistics

Non-negative matrix factorization reveals seasonal and sex-specific metabolic tactics in tropical tilapia

Comp Biochem Physiol Part D Genomics Proteomics. 2025 Feb 19;55:101448. doi: 10.1016/j.cbd.2025.101448. Online ahead of print.

ABSTRACT

Understanding metabolic adaptations to seasonal fluctuations in ectothermic organisms is challenging, especially in tropical species where physiological responses are more pronounced than in temperate or polar counterparts. Traditional analytical methods often fail to account for the complex metabolic adjustments that are present in these substantial responses, and the high-dimensional characteristics of metabolomic data complicate the interpretation process when using conventional statistical methods. We utilized Non-negative Matrix Factorization (NMF), an unsupervised machine learning algorithm, to analyze monthly serum metabolomics data from tilapia over a year in order to overcome these limits. A deeper analysis using NMF demonstrated that carbohydrates gained prominence during warmer months, as evidenced by consistently elevated weights of glycolysis intermediates in our quantitative analysis. Furthermore, fatty acids remained an important factor in both warm and cold seasons. Amino acids emerged as particularly versatile metabolites, exhibiting adaptability during seasonal transitions. This flexibility suggests their crucial role in coordinating energy-related adaptations and potentially facilitating epigenetic and reproductive responses to changing environments. Serum aspartate composition during the warm-cold transition indicated sex-specific metabolic strategies, as sexual dimorphism was observed in the seasonal utilization of fatty acids and aspartate. Collectively, NMF objectively assesses the metabolic tactics of tropical fish and reveals latent patterns in real-world metabolic dynamics. Consequently, it possesses the potential to facilitate metabolomics-driven species conservation in response to environmental changes.

PMID:40020271 | DOI:10.1016/j.cbd.2025.101448

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Nevin Manimala Statistics

Influence of curve location and type of adolescent idiopathic scoliosis on static and dynamic plantar pressure

Gait Posture. 2025 Feb 17;119:39-47. doi: 10.1016/j.gaitpost.2025.02.014. Online ahead of print.

ABSTRACT

OBJECTIVE: This study aimed to investigate the characteristics of various plantar pressure parameters of patients with different curve locations (thoracic/lumbar) and types (single/double) of adolescent idiopathic scoliosis (AIS).

METHODS: Seventy-eight moderate AIS patients were included from Nanjing Drum Tower hospital, who were then classified into 4 groups by curve location and type, single thoracic scoliosis (S-T, n = 20), single lumbar scoliosis (S-L, n = 16), double curves with major curve at thoracic region (D-T, n = 22), double curves with major curve at lumbar region (D-L, n = 20). Another 22 healthy subjects were included as the control group. Multiple static and dynamic features, such as medial-lateral (M-L) area ratio and loading pattern were compared across groups.

RESULTS: For static plantar pressure, on the major curve side, the medial-lateral (M-L) area ratio was significantly different among five groups on both feet (P < 0.01). The ratio of S-T group was significantly lower than lumbar scoliosis groups on major curve side (P < 0.01). In midfoot, ratios of thoracic scoliosis groups were significantly lower than S-L group P < 0.01). On the compensatory side, D-L group had markedly lower ratio than thoracic groups in M-L area ratio and midfoot M-L area ratio (P < 0.01). For dynamic plantar pressure, the maximum pressure of medial rearfoot of thoracic scoliosis was significantly lower than lumbar scoliosis and control group on major curve side(P < 0.01). Meanwhile, the lateral rearfoot of thoracic had greater pressure than lumbar scoliosis groups (P < 0.01). The load distribution of metatarsal head (MH) had marked differences among groups on the compensated side, especially at MH1, MH4 and MH5 P < 0.01). Moreover, the loads of thoracic scoliosis were significantly larger than lumbar scoliosis at MH5 (P < 0.01).

CONCLUSION: In moderate AIS patients, scoliosis curve location significantly affected static and dynamic plantar pressure while single or double curves had limited impact.

PMID:40020270 | DOI:10.1016/j.gaitpost.2025.02.014

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Nevin Manimala Statistics

Estimating the diagnostic performance of serological assays for emerging pathogens using a Bayesian approach: Myxoma virus in the Iberian hare (Lepus granatensis)

Prev Vet Med. 2025 Feb 24;239:106488. doi: 10.1016/j.prevetmed.2025.106488. Online ahead of print.

ABSTRACT

Validated diagnostic tools are essential when conducting serological surveys. However, reliable tests are scarce and hard to attain for emerging pathogens due to the lack of reference tests or samples. Recently, a recombinant myxoma virus (MYXV), named ha-MYXV, raised alarm in the Iberian Peninsula for its impact on Iberian hare (Lepus granatensis) populations and its detection in wild (Oryctolagus cuniculus) and domestic rabbits. Here, we follow a Bayesian approach to evaluate two serological tools, an indirect ELISA (iELISA) and a competitive ELISA (cELISA), used to monitor this emerging pathogen in Iberian hare populations. We modelled serological data from 227 hares conveniently selected retrospectively for their apparent healthy status. First, we applied finite mixture models to adjust the cut-off thresholds of both tests, which improved the agreement between both tests (initial kappa = 0.42, after threshold adjustment = 0.78). Then, we employed Bayesian latent class models (BLCM) to estimate the assays’ specificity (Sp) and sensitivity (Se). The BLCM estimated median Sp of 94.0 % (95 % posterior probability interval (PPI): 85.9-99.4) and 96.1 % (PPI: 87.2-100.0), and Se of 77.7 % (PPI: 61.5-89.5) and 91.7 % (PPI: 78.1-99.9), for the iELISA and the cELISA, respectively. The true seroprevalence estimations show higher values in south-central Spain (ranging from 13.1 % to 70.4 %) and lower in the north (Navarra: 5.5 %). A Bayesian approach allowed to evaluate diagnostic tools for ha-MYXV, an emerging wildlife pathogen, in the absence of reference tests or samples. Future epidemiological studies of myxomatosis in Iberian hares should calculate true seroprevalence based on our estimations.

PMID:40020268 | DOI:10.1016/j.prevetmed.2025.106488

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Nevin Manimala Statistics

The incentive to treat: Physician agency and the expansion of the 340B drug pricing program

J Health Econ. 2025 Feb 3;101:102971. doi: 10.1016/j.jhealeco.2025.102971. Online ahead of print.

ABSTRACT

The 340B Drug Pricing Program incentivizes healthcare providers to increase medication use. It does this by allowing certain safety-net hospitals and clinics to purchase outpatient drugs at considerable discounts from manufacturers but be reimbursed at full price by payers. Yet, previous literature has left largely unstudied how the 340B program influences physician prescribing behavior. In this paper, I provide evidence of physician agency among 340B providers in the treatment of breast cancer. I leverage the staggered diffusion of the program to identify the impact of 340B participation on prescribing behavior and patient outcomes. Physicians who join the 340B program increase the share of patients who receive pharmaceutical treatments and increase the intensity of per-patient prescribing. I also find significant increases in prescribing medications that are not included in clinical treatment recommendations and medications to treat side effects. Despite more intensive treatment use, I find no statistically significant change in survival.

PMID:40020262 | DOI:10.1016/j.jhealeco.2025.102971