Tag: pubmed

Mol Biol Rep. 2023 Jul 6. doi: 10.1007/s11033-023-08636-6. Online ahead of print.

ABSTRACT

BACKGROUND: The conidial Ascomycota fungus Wilsonomyces carpophilus causing shot hole in stone fruits is a major constraint in the production of stone fruits worldwide. Shothole disease symptoms appear on leaves, fruits, and twigs. Successful isolation of the pathogen from different hosts on synthetic culture medium is a time consuming and tedious procedure for identification of the pathogen based on morpho-cultural characterization.

METHODS AND RESULTS: The present research was carried out to develop a successful PCR based early detection protocol for the shot hole disease of stone fruits, viz., peach, plum, apricot, cherry, and almond using the pathogen specific SSR markers developed from the Wilsonomyces carpophilus genome using Genome-wide Microsatellite Analysing Tool package (GMATA) software. Diseased leaf samples of different stone fruits were collected from the SKUAST-K orchard and the pathogen was isolated on potato dextrose agar (PDA) medium and maintained on Asthana and Hawkers’ medium with a total of 50 pathogen isolates comprised of 10 isolates each from peach, plum, apricot, cherry and almond. The DNA was extracted from both healthy and infected leaf samples of different stone fruits. The DNA was also extracted from the isolated pathogen cultures (50 isolates). Out of 2851 SSR markers developed, 30 SSRs were used for the successful amplification of DNA extracted from all the 50 pathogen isolates. These SSRs were used for the amplification DNA from shot hole infected leaf samples of different stone fruits, but the amplification was not observed in the control samples (DNA from healthy leaves), thus confirming the detection of this disease directly from the shot hole infected samples using PCR based SSR markers. To our knowledge, this forms the first report of SSR development for the Wilsonomyces carpophilus and their validation for the detection of shot hole disease directly from infected leaves.

CONCLUSION: PCR based SSR makers were successfully developed and used for the detection of Wilsonomyces carpophilus causing shot hole disease in stone fruits including almond in nuts for the first time. These SSR markers could successfully detect the pathogen directly from the infected leaves of stone fruits namely peach, plum, apricot and cherry including almond from the nuts.

PMID:37410347 | DOI:10.1007/s11033-023-08636-6

Environ Sci Pollut Res Int. 2023 Jul 6. doi: 10.1007/s11356-023-27605-x. Online ahead of print.

ABSTRACT

Water is an essential element in nature. It is used in drinking, irrigation, and industry mainly. Human health is directly linked to groundwater quality and is affected by poor groundwater quality caused by excessive fertilizer application and unhygienic circumstances. Because of increased pollution, investigating the water quality became a point of research for many researchers. There are numerous approaches to assessing water quality, and statistical methods are essential among them. This review paper discusses Multivariate Statistical Techniques, including Cluster Analysis, Principal Component Analysis, Factor Analysis, Geographical Information System, and Analysis of Variance, to name a few. We have presented the significance of each method concisely and how it is being used. In addition, an extensive table is prepared to demonstrate the individual technique along with the computational tool, the type of water bodies, and their respective regions. The advantages and disadvantages of the statistical techniques are also discussed therein. It is found that Principal Component Analysis and Factor Analysis are widely explored techniques.

PMID:37410329 | DOI:10.1007/s11356-023-27605-x

Int Urol Nephrol. 2023 Jul 6. doi: 10.1007/s11255-023-03696-w. Online ahead of print.

ABSTRACT

PURPOSE: End-stage renal disease patients on chronic hemodialysis (HD) have a shortened life expectancy compared to the general population. The aim of this study was to evaluate a possible link between three new and emerging factors in renal pathophysiology: Klotho protein, telomere length in peripheral blood mononuclear cells (TL) and redox status parameters before HD (bHD) and after HD (aHD), and to test mortality prediction capability of these emerging parameters in a population of HD patients.

METHODS: The study included 130 adult patients with average age 66 (54-72), on HD (3 times per week; 4-5 h per session). Klotho level, TL, routine laboratory parameters, dialysis adequacy and redox status parameters: advanced oxidation protein products (AOPP), prooxidant-antioxidant balance (PAB), superoxide anion (O₂^.-), malondialdehyde (MDA), ischemia-modified albumin (IMA), total sulfhydryl group content (SHG), and superoxide dismutase (SOD) were determined.

RESULTS: Klotho concentration was significantly higher aHD; 68.2 (22.6-152.9) vs. bHD 64.2 (25.5-119.8) (p = 0.027). The observed increase in TL was not statistically significant. AOPP, PAB, SHG, and SOD activity were significantly increased aHD (p > 0.001). The patients with the highest mortality risk score (MRS) had significantly higher PAB bHD (p = 0.002). Significantly lower O₂^.- (p < 0.001), SHG content (p = 0.072), and IMA (p = 0.002) aHD were found in patients with the lowest MRS values. Principal component analysis revealed redox balance-Klotho factor as a significant predictor of high mortality risk (p = 0.014).

CONCLUSION: Decreased Klotho and TL attrition as well as redox status disturbance could be connected with higher mortality rate in HD patients.

PMID:37410303 | DOI:10.1007/s11255-023-03696-w

Int Ophthalmol. 2023 Jul 6. doi: 10.1007/s10792-023-02794-z. Online ahead of print.

ABSTRACT

PURPOSE: The purpose of the study was to characterize the subjective visual quality and satisfaction following small-incision lenticule extraction (SMILE) and to identify its influential factors.

SETTING: Peking University Third Hospital, Beijing, China.

DESIGN: This was a retrospective observational study.

METHODS: Patients who had simultaneous binocular SMILE for myopia and myopic astigmatism were included 6 months postoperatively, and the patient-reported outcome questionnaire was employed for the assessment of visual quality in real-life situations. Examinations with SIRIUS combined corneal topography and tomography were performed including the parameters of Strehl ratio (SR), corneal higher-order aberrations (HOAs) within 6.0-mm area, kappa angel, and thinnest corneal thickness. Decentration and effective optical zone (EOZ) were measured based on a tangential pre-post-operation difference map. Binary logistic regression analysis was performed for predictors of patient-reported visual quality.

RESULTS: Clinical data from 97 cases were analyzed retrospectively. Overall satisfaction was 96.91% (94/97). Fluctuation in vision and glare is the most frequent and dominant visual symptoms. SR value increased non-significantly compared with preoperative (P> 0.05). A statistically significant (P < 0.05) increase in total HOAs, spherical aberration, and coma was noted. SR and HOAs were not correlated with the degree of visual symptoms (P > 0.05). No objective parameter was found to be associated with patient-reported visual quality after SMILE (P> 0.05).

CONCLUSION: The high patient-reported satisfaction confirmed the ideal effect on visual quality following SMILE in real-life situations, though some objective optical performances were not satisfying. It is very tolerant toward patients’ conditions and mild deviations, and this study did not find factors affecting visual performances.

PMID:37410299 | DOI:10.1007/s10792-023-02794-z

Int Ophthalmol. 2023 Jul 6. doi: 10.1007/s10792-023-02805-z. Online ahead of print.

ABSTRACT

PURPOSE: Bi-medial rectus recession, which can also be performed using a hang-back technique, is one of the surgical treatment options for infantile esotropia (IE). This study has modified the surgical approach, with outcomes compared to the traditional hang-back technique.

METHODS: The bi-medial recession was performed with a modified hang-back technique in 120 IE patients and with a traditional hang-back technique in 88 cases. Surgical outcomes were reviewed and compared retrospectively.

RESULTS: The patients in the two groups were compared in terms of surgery time, inferior oblique weakening surgery, and the presence of refractive error. The differences between pre-operative and postoperative first-month, sixth-month, and first-year degrees were statistically significant (p < 0.001).

CONCLUSIONS: This modified novel technique aims to avoid unwanted muscle movement in the horizontal and vertical axes and a gap in the middle of the recessed muscle, as seen in the traditional hang-back technique. Further, the modified technique resulted in less over- and under-correction as well as alphabetic pattern deviation.

PMID:37410297 | DOI:10.1007/s10792-023-02805-z

Biol Trace Elem Res. 2023 Jul 6. doi: 10.1007/s12011-023-03743-8. Online ahead of print.

ABSTRACT

Ganga river is the inhabitant of more than 190 fish species and important river system of India. Potentially toxic elements (PTEs) in the Gangetic riverine ecosystem are a hot environmental issue. A detailed evaluation of PTEs bioaccumulation in Gangetic fishes is required to safeguard human health. The present study investigated the bioaccumulation of PTEs (Cd, Co, Cr, Cu, Li, Ni, Pb, Se, Zn, and Mn) within 12 economic fish species (n = 72) collected from the lower Gangetic stretch. The mean concentrations of PTEs followed the order Zn > Cu > Mn > Ni > Se > Cr > Pb > Co ~ Li > Cd. Li and Se bioaccumulation were studied first time from Gangetic fishes. Results demonstrated that all the selected PTEs were below the maximum permissible limit recommended by reference standards except for Zn in L. catla and L. rohita. For all PTEs, the metal pollution index (MPI), hazard quotient (THQ), and hazard index (HI) were < 1, indicating that these PTEs do not pose a health risk to the public through the dietary intake of fish in this study area. All studied fish were acceptable in terms of carcinogenic risk (CR) from exposure to Cd, Cr, and Pb. Multivariate statistical analysis suggests that inter-correlated metals have similar dispersion properties and bioaccumulation homology within the body. This study provides a scientific basis for food safety assessment and continuous monitoring of PTEs in Gangetic fishes is suggested in the future to safeguard human health.

PMID:37410267 | DOI:10.1007/s12011-023-03743-8

Atten Percept Psychophys. 2023 Jun 28. doi: 10.3758/s13414-023-02693-6. Online ahead of print.

ABSTRACT

In everyday life, people often work together to accomplish a joint goal. Working together is often beneficial as it can result in a higher performance compared to working alone – a so-called “group benefit”. While several factors influencing group benefits have been investigated in a range of tasks, to date, they have not been examined collectively with an integrative statistical approach such as linear modeling. To address this gap in the literature, we investigated several factors that are highly relevant for group benefits (i.e., task feedback, information about the co-actor’s actions, the similarity in the individual performances, and personality traits) and used these factors as predictors in a linear model to predict group benefits in a joint multiple object tracking (MOT) task. In the joint MOT task, pairs of participants jointly tracked the movements of target objects among distractor objects and, depending on the experiment, either received group performance feedback, individual performance feedback, information about the group member’s performed actions, or a combination of these types of information. We found that predictors collectively account for half of the variance and make non-redundant contributions towards predicting group benefits, suggesting that they independently influence group benefits. The model also accurately predicts group benefits, suggesting that it could be used to anticipate group benefits for individuals that have not yet performed a joint task together. Given that the investigated factors are relevant for other joint tasks, our model provides a first step towards developing a more general model for predicting group benefits across several shared tasks.

PMID:37410254 | DOI:10.3758/s13414-023-02693-6

Langenbecks Arch Surg. 2023 Jul 6;408(1):267. doi: 10.1007/s00423-023-02991-5.

ABSTRACT

BACKGROUND: This study aims to determine the most accurate appendicitis scoring system and optimal cut-off points for each scoring system.

METHODS: This single-centred prospective cohort study was conducted from January-to-June 2021, involving all patients admitted on suspicion of appendicitis. All patients were scored according to the Alvarado score, Appendicitis Inflammatory Response (AIR) score, Raja Isteri Pengiran Anak Saleha (RIPASA) score and Adult Appendicitis score (AAS). The final diagnosis for each patient was recorded. Sensitivity and specificity were calculated for each system. Receiver operating characteristic (ROC) curve was constructed for each scoring system, and the area under the curve (AUC) was calculated. Optimal cut-off scores were calculated using Youden’s Index.

RESULTS: A total of 245 patients were recruited with 198 (80.8%) patients underwent surgery. RIPASA score had higher sensitivity and specificity than other scoring systems without being statistically significant (sensitivity 72.7%, specificity 62.3%, optimal score 8.5, AUC 0.724), followed by the AAS (sensitivity 60.2%, specificity 75.4%, optimal score 14, AUC 0.719), AIR score (sensitivity 76.7%, specificity 52.2%, optimal score 5, AUC 0.688) and Alvarado score (sensitivity 69.9%, specificity 62.3%, optimal score 5, AUC 0.681). Multiple logistic regression revealed anorexia (p-value 0.018), right iliac fossa tenderness (p-value 0.005) and guarding (p-value 0.047) as significant clinical factors independently associated with appendicitis.

CONCLUSION: Appendicitis scoring systems have shown moderate sensitivity and specificity in our population. The RIPASA scoring system has shown to be the most sensitive, specific and easy-to-use scoring system in the Malaysian population whereas the AAS is most accurate in excluding low-risk patients.

PMID:37410251 | DOI:10.1007/s00423-023-02991-5

Diabetes Obes Metab. 2023 Jul 6. doi: 10.1111/dom.15186. Online ahead of print.

ABSTRACT

AIMS: We aimed to develop and internally validate a real-world prognostic model for Level 3 hypoglycaemia risk compatible with outpatient care in the United States.

MATERIALS AND METHODS: iNPHORM is a 12-month, US-based panel survey. Adults (18-90 years old) with type 1 diabetes mellitus or insulin- and/or secretagogue-treated type 2 diabetes mellitus were recruited from a nationwide, probability-based internet panel. Among participants completing $\ge$ 1 follow-up questionnaire(s), we modelled 1-year Level 3 hypoglycaemia risk using Andersen and Gill’s Cox survival and penalized regression with multiple imputation. Candidate variables were selected for their clinical relevance and ease of capture at point-of-care.

RESULTS: In total, 986 participants [type 1 diabetes mellitus: 17%; men: 49.6%; mean age: 51 (SD: 14.3) years] were analysed. Across follow-up, 035.1 (95% CI: 32.2-38.1)% reported ≥1 Level 3 event(s), and the rate was 5.0 (95% CI: 4.1-6.0) events per person-year. Our final model showed strong discriminative validity and parsimony (optimism corrected c-statistic: 0.77). Numerous variables were selected: age; sex; body mass index; marital status; level of education; insurance coverage; race; ethnicity; food insecurity; diabetes type; glycated haemoglobin value; glycated haemoglobin variability; number, type and dose of various medications; number of SH events requiring hospital care (past year and over follow-up); type and number of comorbidities and complications; number of diabetes-related health care visits (past year); use of continuous/flash glucose monitoring; and general health status.

CONCLUSIONS: iNPHORM is the first US-based primary prognostic study on Level 3 hypoglycaemia. Future model implementation could potentiate risk-tailored strategies that reduce real-world event occurrence and overall diabetes burden.

PMID:37409569 | DOI:10.1111/dom.15186

Int J Cancer. 2023 Jul 6. doi: 10.1002/ijc.34647. Online ahead of print.

ABSTRACT

Neoadjuvant programmed cell death protein 1 (PD-1) blockade exhibits promising efficacy in patients with mismatch repair deficient (dMMR) colorectal cancer (CRC). However, discrepancies between radiological and histological findings have been reported in the PICC phase II trial (NCT03926338). Therefore, we strived to discern radiological features associated with pathological complete response (pCR) based on computed tomography (CT) images. Data were obtained from the PICC trial that included 36 tumors from 34 locally advanced dMMR CRC patients, who received neoadjuvant PD-1 blockade for 3 months. Among the 36 tumors, 28 (77.8%) tumors achieved pCR. There were no statistically significant differences in tumor longitudinal diameter, the percentage change in tumor longitudinal diameter from baseline, primary tumor sidedness, clinical stage, extramural venous invasion status, intratumoral calcification, peritumoral fat infiltration, intestinal fistula and tumor necrosis between the pCR and non-pCR tumors. Otherwise, tumors with pCR had smaller posttreatment tumor maximum thickness (median: 10 mm vs 13 mm, P = .004) and higher percentage decrease in tumor maximum thickness from baseline (52.9% vs 21.6%, P = .005) compared to non-pCR tumors. Additionally, a higher proportion of the absence of vascular sign (P = .003, odds ratio [OR] = 25.870 [95% CI, 1.357-493.110]), nodular sign (P < .001, OR = 189.000 [95% CI, 10.464-3413.803]) and extramural enhancement sign (P = .003, OR = 21.667 [2.848-164.830]) was observed in tumors with pCR. In conclusion, these CT-defined radiological features may have the potential to serve as valuable tools for clinicians in identifying patients who have achieved pCR after neoadjuvant PD-1 blockade, particularly in individuals who are willing to adopt a watch-and-wait strategy.

PMID:37409565 | DOI:10.1002/ijc.34647