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Nevin Manimala Statistics

Gut microbiota, plasma metabolites, and venous thromboembolism: a Mendelian randomization study

AMB Express. 2025 Jun 20;15(1):97. doi: 10.1186/s13568-025-01903-8.

ABSTRACT

Emerging evidence links gut microbiota (GM) to venous thromboembolism (VTE), deep vein thrombosis (DVT), and pulmonary embolism (PE), but causal insights are limited. Using two-sample Mendelian randomization (MR), we assessed causal effects of 211 GM taxa and 489 plasma metabolites on VTE/DVT/PE. Genetic instruments (single nucleotide polymorphism) for GM and metabolites were leveraged to infer causality, complemented by mediation and pathway analyses. Sixteen GM taxa (e.g., protective Firmicutes, Clostridia; risk-enhancing Bacteroidetes, Desulfovibrionaceae) and 40 metabolites showed causal associations with VTE/DVT/PE. Reverse MR identified 11 GM changes secondary to thrombosis. No pleiotropy or heterogeneity was detected. Ten metabolite-mediated pathways (e.g., arginine biosynthesis) bridged GM to thrombosis, suggesting GM-metabolite interactions as potential biomarkers for thrombotic risk stratification and prognosis.

PMID:40540143 | DOI:10.1186/s13568-025-01903-8

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Nevin Manimala Statistics

Effect of vitreopapillary interface adhesions on optic disc: an OCTA study

Int Ophthalmol. 2025 Jun 20;45(1):249. doi: 10.1007/s10792-025-03633-z.

ABSTRACT

PURPOSE: This study aims to investigate the effects of vitreopapillary adhesion (VPA) on the optic disc (OD) microvascular structure using optical coherence tomography angiography (OCTA).

METHODS: Thirty five patients with complete PVD at the posterior pole and residual optic disc adhesion (stage 3) (using the posterior vitreous detachment (PVD) staging by Uchino et al.) were included in the study. As a control group, 34 healthy individuals were included. RNFL thickness, rim area, disc area, cup/disc ratio, perfusion and flux index measurements were analysed with an optical coherence tomography angiography (OCTA).

RESULTS: While there was no statistically significant difference between the retinal nerve fiber layer thicknesses of both groups except the upper quadrant, the upper quadrant of RNFL thickness was found to be statistically significantly thinner in the vitreo-papillary adhesion (VPA) group. Mean value of disc area was 1.94 ± 0.38 in the adhesion group and 2.17 ± 0.42 in the control group (p = 0.060). Cup/disc ratios of VPA and control groups were 0.16 ± 0.15, 0.44 ± 0.14, respectively (p = 0.000).Cup volumes were also statistically significantly smaller in the adhesion group in parallel with the c/d ratio (0.02 ± 0.04, 0.16 ± 0.19 p = 0.000). Optic disc perfusions were 43.77% ± 2.22% in the adhesion group and 45.31 ± 1.20% in the control group (p = 0.003).

CONCLUSION: The significantly lower C/D ratio and cup volume in patients with vitreopapillary adhesion indicates that adhesion may occur more frequently in especially crowded discs. Although OCTA may be misleading in VPA patients, close monitoring of increased synretic vitreous gel traction on the OD with OCTA may be beneficial especially in patients with completed macular PVD. Monitoring VPA with OCTA may provide valuable insights into early vascular alterations that may contribute to non-arteritic anterior ischemic optic neuropathy (NAION) or papillary vitreous detachment neuropathy.

PMID:40540137 | DOI:10.1007/s10792-025-03633-z

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Nevin Manimala Statistics

The relationship between occupation and specific forms of idiopathic adult-onset dystonia

Neurol Sci. 2025 Jun 20. doi: 10.1007/s10072-025-08303-7. Online ahead of print.

ABSTRACT

BACKGROUND: The development of idiopathic adult-onset dystonia (IAOD) in different body parts is associated with specific demographic and clinical characteristics, as well as with specific risk factors.

OBJECTIVE: To investigate whether specific occupations are associated with specific forms of IAOD at onset, namely blepharospasm (BSP), cervical dystonia (CD), and task-specific upper limb dystonia (TS-ULD).

METHODS: Data from 905 IAOD patients enrolled in the Italian Dystonia Registry were analysed. Each patient was assigned to the corresponding occupational category by specialists in occupational medicine according to the classification of the Italian National Institute of Statistics. Logistic regression models (adjusted for sex, year of birth, Italian geographical areas, and age at dystonia onset) were computed to assess the association between occupation and specific dystonia at onset, using patients who developed focal dystonia in other body parts as controls.

RESULTS: Compared to other occupations, trades workers exhibited an increased risk for BSP at onset (OR = 2.6, 95% CI 1.6-4.2), cleaners for CD (OR = 3.4, 95% CI 1.2-9.9), and musicians for TS-ULD (OR = 36.3, 95% CI 11.3-117.1). The longer the duration of employment before the onset of dystonia, the greater the risk of dystonia.

CONCLUSIONS: We provided novel information indicating that exposure to specific occupations may trigger specific forms of IAOD, namely BSP, CD, and TS-ULD. The associations highlighted by this study may reflect a common pathophysiological mechanism relying on the frequent performance of repetitive movements in a specific body part.

PMID:40540127 | DOI:10.1007/s10072-025-08303-7

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Research priorities of the European Society of Clinical Pharmacy (ESCP): a questionnaire-based study

Int J Clin Pharm. 2025 Jun 20. doi: 10.1007/s11096-025-01954-8. Online ahead of print.

ABSTRACT

INTRODUCTION: It is important for health professional societies to involve members in defining their roles and future activities including research priorities.

AIM: This study aimed to identify members’ views on the areas of research that European Society of Clinical Pharmacy (ESCP) should prioritise in delivering research support, research projects and education.

METHOD: An online questionnaire was initially developed by the ESCP Research Committee and reviewed by the research team. It included structured and open-ended items related to respondents’ demographics, research experience, views on future research priorities, topics that ESCP should prioritise, and barriers to research involvement. After testing face and content validity, the questionnaire was sent to all ESCP members (N = 417). Descriptive statistics and summative content analysis were used.

RESULTS: Eighty-two responses were received (response rate: 19.7%). Research on real-world processes that facilitate the implementation of clinical pharmacy services into every-day practice was the priority for most respondents (n = 77, 93.9%). Respondents believed that ESCP should focus on research support for implementation science (n = 52, 63.4%) and methods to analyse clinical judgement and decision-making (n = 48, 58.5%). The perceived barriers to developing high-quality research in clinical pharmacy were reported as a lack of knowledge, skills and training, limited funding opportunities and insufficient time.

CONCLUSION: Research topics identified will help to inform ESCP and its committees on the priorities for research activities of the society in the near future, as well as other collaborating professional organisations of the current priority research objectives of ESCP in the international context.

PMID:40540123 | DOI:10.1007/s11096-025-01954-8

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Nevin Manimala Statistics

World of ScoreCraft: Novel Multi-Scorer Experiment on the Impact of a Decision Support System in Sleep Staging

J Sleep Res. 2025 Jun 19:e70113. doi: 10.1111/jsr.70113. Online ahead of print.

ABSTRACT

Manual scoring of polysomnography (PSG) is a time-intensive task, prone to inter-scorer variability that can impact diagnostic reliability. This study investigates the integration of decision support systems (DSS) into PSG scoring workflows, focusing on their effects on accuracy, scoring time and potential biases toward recommendations from artificial intelligence (AI) compared to human-generated recommendations. Using a novel online scoring platform, we conducted a repeated-measures study with sleep technologists, who scored traditional and self-applied PSGs. Participants were occasionally presented with recommendations labelled as either human- or AI-generated. As the goal of this study was to isolate the effect of perceived recommendation sources on scorer behaviour, all recommendations were human-generated. We found that traditional PSGs tended to be scored slightly more accurately than self-applied PSGs, but this difference was not statistically significant. Correct recommendations significantly improved scoring accuracy for both PSG types, while incorrect recommendations reduced accuracy. No significant bias was observed toward or against AI-generated recommendations compared to human-generated recommendations. These findings highlight the potential of DSSs to enhance PSG scoring reliability. However, ensuring the accuracy of the suggestions is critical to maximising its benefits. Future research should explore the long-term impacts of DSS on scoring workflows and strategies for integrating AI in clinical practice.

PMID:40537888 | DOI:10.1111/jsr.70113

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Unveiling the genetic association between rheumatoid arthritis and four common hand pathologies

Eur J Med Res. 2025 Jun 19;30(1):492. doi: 10.1186/s40001-025-02695-0.

ABSTRACT

BACKGROUND: Rheumatoid arthritis (RA), carpal tunnel syndrome (CTS), trigger finger (TF), Dupuytren’s disease (DD) and de Quervain tenosynovitis (DQT) are musculoskeletal disorders that affect hand abilities. Previous studies have suggested inconsistent results on their association. This study aims to determine the cause-and-effect relationship between RA and other four hand disorders.

METHODS: We collected summary-level statistics for RA, CTS, TF, DD, and DQT from genome-wide association studies (GWAS). A univariable Mendelian randomization (UVMR) analysis was conducted to investigate the cause-and-effect relationship between RA and other hand conditions. Furthermore, a multivariable Mendelian randomization (MVMR) analysis was conducted to evaluate the influence of confounding variables such as glycemia, obesity, and lifestyle factors on this causal association. The robustness of our findings is assessed by a series of sensitivity analyses at the end.

RESULTS: The inverse variance-weighted method in UVMR revealed that genetically predicted RA was positively associated with risks of CTS (OR = 04, 95% CI 1.01-1.07, P = 4.97E-03), TF (OR = 1.13, 95% CI 1.06-1.20, P = 8.97E-05), and DQT (OR = 1.11, 95% CI 1.02-1.21, P = 0.019), but not linked with DD (OR = 1.01, 95% CI = 0.96-1.07, P = 0.61). After adjusting for glycemia, obesity, and lifestyle factors in the MVMR analyses, the causal effects of RA on increased risks of CTS and TF remained significant. Leave-one-out analyses demonstrated that no individual single nucleotide polymorphism (SNP) significantly impacted RA’s overall causal effect estimates on CTS and TF.

CONCLUSIONS: Our results indicate that RA is an independent genetic factor contributing to CTS and TF, but not to DQT or DD. This finding supports recommendations aimed at preventing the occurrence of CTS and TF in patients with RA. However, further high-quality studies are needed to validate this association and to determine its general applicability.

PMID:40537869 | DOI:10.1186/s40001-025-02695-0

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Association between dietary self-care adherence and depression among adults living with type 2 diabetes mellitus in Ghana: a cross-sectional study

J Health Popul Nutr. 2025 Jun 19;44(1):210. doi: 10.1186/s41043-025-00859-6.

ABSTRACT

INTRODUCTION: Dietary recommendation plays a quintessential role in diabetes self-management. Persons living with diabetes (PLWD) are expected to consume diets rich in whole grains, fruits, vegetables, legumes and nuts, while limiting alcohol consumption, refined grains, red and processed meats, and low sugar-sweetened beverages. However, the following questions remain: (a) What is the association between dietary adherence and depression among persons living with diabetes in Ghana? (b) Do adherence to a general diet and specific diet recommendations have the same association with depression? To address these questions, we examined the association between dietary self-care adherence and depression among PLWD in Ghana.

METHODS: This cross-sectional study was conducted in the Ashanti region of Ghana. The study involved 398 PLWD. Bivariable and multivariable logistic regression models were performed to assess the association between dietary adherence and depression. The results of the multivariable logistic regression were presented in adjusted odds ratio (AOR) with the corresponding 95% confidence intervals (CIs). Statistical significance was set at < 0.05.

RESULTS: Overall, we estimated a depression prevalence of 38.7% among the participants. PLWD who had a high dietary self-care adherence were significantly less likely to experience depression (COR = 0.27; 95% CI: 0.11-0.66). This association remained statistically significant after adjusting for covariates (AOR = 0.28; 95% CI: 0.10-0.78). While a high general diet score was associated with lower odds of depression, it was statistically not significant. However, PLWD with a higher specific diet score were significantly less likely to experience depressive symptoms (AOR = 0.80; 95% CI: 0.73-0.88).

CONCLUSION: The significant inverse association between adherence to specific diets and depression points to an area that clinicians and public health authorities must prioritise. Our findings suggest that encouraging PLWD to adhere to specific diet recommendations (e.g., fruit and vegetable consumption, practicing carbohydrate spacing, and consuming low-fat diets) could help reduce the risk of depression. Hence, clinicians must emphasise the mental health benefits of adhering to dietary recommendations during their dietary counselling sessions with PLWD.

PMID:40537866 | DOI:10.1186/s41043-025-00859-6

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Age-specific serum calcium levels in healthy individuals from the Xing’an League: a descriptive study

J Health Popul Nutr. 2025 Jun 19;44(1):209. doi: 10.1186/s41043-025-00954-8.

ABSTRACT

OBJECTIVE: To determine the age-specific distribution of serum calcium levels in the Xing’an League population and assess the applicability of current national standards.

METHODS: Data were collected from 3000 healthy individuals across different age groups in the Xing’an League, stratified by sex and age. Serum calcium levels were measured, and statistical methods were used to analyse sex- and age-related differences. The relevance of the current Chinese Health Industry Standard reference intervals for serum calcium was evaluated, and age-related trends were assessed.

RESULTS: Significant differences in serum calcium levels were found between sexes and across age groups. The current national reference intervals did not adequately capture the age- and region-specific characteristics of serum calcium levels in the Xing’an League population, highlighting the need for localized evaluation criteria.

CONCLUSION: The study demonstrates the impact of sex and age on serum calcium levels and emphasises the importance of recognising regional variations. The findings provide a scientific basis for enhancing disease prevention and developing personalised treatment strategies to address regional disparities in clinical practice.

PMID:40537857 | DOI:10.1186/s41043-025-00954-8

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Nevin Manimala Statistics

Building linkages between private pharmacies and public facilities to improve diabetes and hypertension care in urban areas of Nepal: a protocol for implementation research

Arch Public Health. 2025 Jun 19;83(1):160. doi: 10.1186/s13690-025-01586-4.

ABSTRACT

BACKGROUND: Rapid urbanization is accelerating in low- and middle-income countries (LMICs), which impacts health behaviors and contributes to noncommunicable diseases (NCDs), such as diabetes and hypertension. As primary care services are overstretched, urban residents rely on pharmacies, creating an urgent need to implement evidence-based approaches such as the World Health Organization’s Package of Essential Non-communicable Diseases (PEN) to reach low-income households at risk of hypertension and diabetes. This study aims to identify the facilitators and barriers to the adoption, implementation, and long-term delivery of strategies to link pharmacies with public facilities in Pokhara Metropolitan City Nepal, to improve diabetes and hypertension prevention and management among poor urban populations.

METHODS AND ANALYSIS: This study uses a sequential mixed-method design within the RE-AIM framework. Data from client surveys will assess the costs and effectiveness of system linkages and interventions in improving diabetes and hypertension screening, management, and referral. Data will be collected at four time points from at least 20 clients per pharmacy and public health facility at baseline, midline, and endline and, to assess maintenance of delivery, post endline. During each time point, repeat questionnaires will be used to assess clients’ adherence to lifestyle and referral advice. The quantitative data will be analyzed via descriptive statistics and logistic regression models to identify factors associated with change in major outcomes. Qualitative data from semi-structured interviews with health workers at pharmacies, clients, and public health facility staff will be analyzed via thematic analysis to identify barriers to and facilitators of intervention adoption, implementation, and sustainability. Endline and post-endline surveys will replicate baseline methods to evaluate intervention impact.

DISCUSSION: This study will provide insights into how private pharmacies can be linked to the public health system to provide appropriate, quality services for diabetes and hypertension within the context of a pluralistic urban health system. Using the RE-AIM framework will enable assessment across implementation domains, providing valuable insights for local governments and health systems within Nepal. Given the rapid urbanization and increasing prevalence of NCDs, which characterize the majority of LMICs, our study contributes to the understanding of how to implement such strategies to meet the needs of the urban poor in other similar contexts.

PMID:40537852 | DOI:10.1186/s13690-025-01586-4

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What is the optimal approach to analyse ventilator-free days? A simulation study

Crit Care. 2025 Jun 19;29(1):251. doi: 10.1186/s13054-025-05474-9.

ABSTRACT

BACKGROUND: Ventilator-free days (VFDs) are a composite outcome in critical care research, reflecting both survival and mechanical ventilation duration. However, analysis methods for VFDs are inconsistent, with some focusing on counts and others on time-to-event outcomes, while other approaches such as the multistate model and the win ratio have emerged. We aimed to evaluate various statistical models through simulations to identify the optimal approach for analysing VFDs.

METHODS: First, 16 datasets of 300 individuals were simulated, comparing a control group to an intervention with varying survival rates and ventilation durations. Various statistical models were evaluated for statistical power and Type I error rate. Four clinical trial datasets (LIVE study, NCT02149589; ARMA study, NCT00000579; ACURASYS study, NCT00299650; COVIDICUS study, NCT04344730) were then used to apply the same statistical models to analyse VFDs. Twelve statistical methods were evaluated, including count-based, time-to-event approaches, and the win-ratio. Additionally, sensitivity analyses were conducted.

RESULTS: Most statistical methods effectively controlled Type I error rate, except for the zero-inflated and hurdle Poisson/negative binomial count submodels, as well as the cause-specific Cox regression model for death. The power to detect survival benefit and ventilation duration effects varied, with time-to-event approaches, the Mann-Whitney test, the proportional odds model and the win ratio generally performing best. Similar results were observed in sensitivity analyses. In the real datasets, the multistate model, the Mann-Whitney test, the proportional odds model and the win ratio generally showed a significant association between VFDs and randomisation groups.

CONCLUSIONS: The multistate model could be recommended as the optimal approach for analysing VFDs, as it outperformed the other methods and offers a more interpretable effect size than the proportional odds model and the win ratio.

PMID:40537834 | DOI:10.1186/s13054-025-05474-9