Tag: pubmed

Crit Rev Food Sci Nutr. 2022 Sep 2:1-19. doi: 10.1080/10408398.2022.2117786. Online ahead of print.

ABSTRACT

Various methodologies including genetic analyses, morphometrics, proteomics, lipidomics, metabolomics, etc. are now used or being developed to authenticate fish and seafood. Such techniques usually lead to the generation of enormous amounts of data. The analysis and interpretation of this information can be particularly challenging. Statistical techniques are therefore commonly used to assist in analyzing these data, visualizing trends and differences and extracting conclusions. This review article aims at presenting and discussing statistical methods used in studies on fish and seafood authenticity and adulteration, allowing researchers to consider their options based on previous successes/failures but also offering some recommendations about the future of such techniques. Techniques such as PCA, AMOVA and F_ST statistics, that allow the differentiation of genetic groups, or techniques such as MANOVA that allow large data sets of morphometric characteristics or elemental differences to be analyzed are discussed. Furthermore, methods such as cluster analysis, DFA, CVA, CDA and heatmaps/Circos plots that allow samples to be differentiated based on their geographical origin are also reviewed and their advantages and disadvantages as found in past studies are given. Finally, mathematical simulations and modeling are presented in a detailed review of studies using them, together with their advantages and limitations.

PMID:36052815 | DOI:10.1080/10408398.2022.2117786

Ying Yong Sheng Tai Xue Bao. 2022 Jul;33(7):1937-1947. doi: 10.13287/j.1001-9332.202207.019.

ABSTRACT

In this study, the biomass models for natural Quercus mongolica in Heilongjiang Province were constructed based on the predictors of diameter at breast height (D) and tree height (H) by several methods including multivariate likelihood analysis and seemingly unrelated regression. The results showed that the H could significantly improve the stem biomass model, with the coefficient of determination (R²) being increased from 0.953 to 0.988 and the root mean square error (RMSE) being reduced by 14 kg, but it had no significant improvement for the biomass model of branch, foliage, and root. The error structures of both biomass model systems (only D and D–H) were multiplicative, indicating that the linear models after logarithmic transformation were more appropriate. The R² for the biomass models of stem, branch, foliage and root were 0.953-0.988, 0.982-0.983, 0.916-0.917, and 0.951-0.952, while the RMSE were 13.42-27.03, 6.84-7.00, 1.95-1.97 and 9.71-9.84 kg. Compared with the feasible generalized least squares (FGLS) approach, Bayesian estimation had similar fitting performance and provided parameter estimates with different variations. The standard errors of parameters for FGLS were 0.054-0.211. There were similar variations (standard deviations of 0.055-0.221) for the two Bayesian estimation with no prior information (DMC and Gibbs1). The Gibbs sampler with a multivariate normal distribution with a mean vector of 0, variances of 1000 and covariances of 0 (Gibbs2) or the prior information from the historical researches summary for Quercus trees biomass models (Gibbs3) produced greater variation than those of FGLS, DMC, and Gibbs1 (stan-dard deviations were 0.080-0.278), while Gibbs sampler with the prior information obtained from own data (Gibbs4) provided the lower variations than others (standard deviations were 0.004-0.013). The Gibbs4 approach provided the narrowest 95% prediction interval and produced the smaller prediction biases, with the average absolute error percentage (MAPE) for stem, branch, foliage, root and total of the only-D biomass model being 19.8%, 24.7%, 24.6%, 29.0% and 13.1%, while MAPE for the corresponding components of D-H biomass model kept same except for stem and total decreased to 10.5% and 9.8%, which indicated that Gibbs4 could provide more accurate biomass predictions. Compared with classical statistics, accurate prior information made Bayesian seemingly unrelated regression an advantage in estimation stability and uncertainty reduction.

PMID:36052798 | DOI:10.13287/j.1001-9332.202207.019

Photodermatol Photoimmunol Photomed. 2022 Sep 2. doi: 10.1111/phpp.12832. Online ahead of print.

ABSTRACT

BACKGROUND: Few studies have reported postoperative relapse of condyloma acuminatum (CA) after 5-aminolevulinic acid photodynamic therapy (ALA-PDT) in human immunodeficiency virus (HIV) positive patients.

METHODS: The clinical data of HIV-positive CA patients treated with ALA-PDT from October 2018 to December 2019 were analyzed retrospectively. Univariate and multivariate Cox regression was used to analyze the variables related to postoperative recurrence. Pearson correlation test was employed to analyze the correlation between CD4⁺ T cell count and postoperative recurrence rate. Kaplan-Meier method was used to compare the CA recurrence after ALA-PDT in low CD4 group and high CD4 group.

RESULTS: A total of 38 HIV-positive patients with CA were included in the study. Among them, 26 patients experienced CA recurrence within 6 months, and the recurrence rate was 68.4%. CD4⁺ T cell count was 187.0 (79.0-596.0) cells/uL in relapsed patients and 406.0 (89.0-612.0) cells/uL in non-relapsed patients, showing a statistically significant difference (P=0.005). Pearson correlation coefficient analysis revealed a negative correlation between CD4⁺ T cell count and postoperative recurrence rate (P = 0.005, r = -0.443). Univariate regression analysis showed that CD4⁺ T cell count was correlated with postoperative recurrence, hazard ratio (HR) was 0.99 [95% Confidence interval (CI) = 0.99-1.0, P=0.012]. Multivariate Cox regression analysis showed that with the low CD4⁺ T cell count as the reference, the high CD4⁺ T cell count was negatively correlated with postoperative recurrence (HR=0.09, 95% CI 0.01- 0.87, P =0.038).

CONCLUSIONS: Peripheral blood CD4⁺ T cell count can predict the CA recurrence rate after ALA-PDT in HIV-positive patients.

PMID:36052757 | DOI:10.1111/phpp.12832

Biomark Med. 2022 Sep 2. doi: 10.2217/bmm-2022-0368. Online ahead of print.

ABSTRACT

Aim: The aim of this study was to measure serum levels of methylarginine derivatives and related metabolites in patients with gout. Materials & methods: This study enrolled 100 patients with gout and 80 patients in the control group. Serum asymmetric dimethylarginine, symmetric dimethylarginine, L-N-monomethylarginine, arginine, homoarginine, citrulline and ornithine levels were measured with tandem mass spectrometry. Results: Serum ornithine, citrulline and total methylated arginine load levels were statistically significantly higher in patients with gout compared with the control group, while serum arginine and homoarginine levels and global arginine bioavailability ratio were statistically significantly lower. Conclusion: There may be an association between gout, methylarginine levels and hyperuricemia and increased risk of cardiovascular disease.

PMID:36052727 | DOI:10.2217/bmm-2022-0368

Transfusion. 2022 Sep 2. doi: 10.1111/trf.17081. Online ahead of print.

ABSTRACT

BACKGROUND: Bacterial contamination in platelets remain a major public health concern, which prompted the US Food and Drug Administration guidance for bacterial contamination mitigation. Pathogen reduction technology (PRT) is one mitigation strategy that has shown success in Europe over the last decade. Therefore, our center sought to transition from a dual system of bacterial culturing (BacT) and PRT to full PRT.

METHODS: A 1 month pilot study was conducted to simulate 100% PRT conditions. Our center also collected baseline data on key platelet production metrics in the 4 months prior to 100% PRT and compared it to the 4 months post-implementation.

RESULTS: The pilot study showed no statistical differences in split rate, proportion of low-yield products, or proportion of single, double, and triple collections. The only observed difference was an 11 min increase in the average duration of double collections. Our baseline versus post-implementation monitoring showed no difference in split rate, discard rate, percentage of low-yield units, and average yield of low yield units. Statistical differences were detected in the proportion of single, double, and triple collections, as well as the average yield of full dose products. Roughly 20% of our inventory consisted of low-yield products.

DISCUSSION: With suitable mitigation strategies, transitioning to a full PRT inventory may result in higher net margins while not adversely affecting overall platelet production. A pilot study is a good way to project potential effects of switching from a dual BacT and PRT inventory to full PRT, and can be adopted by other centers aiming to make the transition.

PMID:36052676 | DOI:10.1111/trf.17081

J Esthet Restor Dent. 2022 Sep 2. doi: 10.1111/jerd.12959. Online ahead of print.

ABSTRACT

BACKGROUND: The prosthetic screw fixes the prostheses to the implants. Upon osteointegration, the untightening of the prosthetic screw is the most common problem in oral rehabilitation with implants.

OBJECTIVE: To study the deformation of the implant retaining hexagonal screw head.

METHODS: This investigation used two methods for evaluating the screw head’s area of deformation (mm² ): a stereoscopic microscopy and micro computed tomography (microCT). For stereoscopic microscopy, 16 titanium alloy (T) and 16 titanium gold-plated alloy (G) screws of the Zimmer Biomet™ brand were used, divided into eight groups: group 0 (control group), groups T1 and G1 (screws tightened 10 times to 20 Ncm), the groups T2 and G2 (screws tightened 20 times to 20 Ncm) and the groups T3 and G3 (screws tightened 10 times to 30 Ncm). In the study with microCT, one screw was randomly chosen from each of the groups described above to perform the scanning by microCT.

RESULTS: When comparing the type of screw material using stereoscopic microscopy, no statistically significant differences were found (p > 0.05). Contrarily, different number of successive grips and different torque value showed statistically significant differences in the head section of the retaining screws (p < 0.05). The observation by microCT showed the torque applied is crucial to the head deformation in titanium screws. In gold-plated screws the successive tightening appears to be pivotal.

CONCLUSION: Titanium and gold screws tend to behave similarly. By increasing the tightening cycles and the torque values of protocols greater levels of deformations can be expected. In general, microCT data showed better results for gold-plated titanium alloy.

CLINICAL SIGNIFICANCE: To control severe screw head deformation and the impossibility of untightening the implant’s restoration, clinicians should avoid extreme torque values and prevent surpassing 10 tightening cycles.

PMID:36052667 | DOI:10.1111/jerd.12959

Biomark Med. 2022 Sep 2. doi: 10.2217/bmm-2022-0265. Online ahead of print.

ABSTRACT

Aim: The study investigated heparin-binding protein (HBP) levels in patients with severe COVID-19 pneumonia and their relation to prognosis. Methods: A total of 134 patients with serious COVID-19 pneumonia were prospectively analyzed. HBP levels were statistically compared between both the patient and healthy control groups and within the patient group itself. Results: HBP was defined to be significantly higher in the patient group compared with the control group. There was a statistically significant distinction between the patients who survived and those who died with regard to HBP levels. When the cutoff value of HBP was >13.47, sensitivity (89.8%), specificity (74.1%) had area under the curve values of 0.806 (p < 0.001). Conclusion: HBP level may be used for prognosis prediction of patients with COVID-19.

PMID:36052658 | DOI:10.2217/bmm-2022-0265

Gut Liver. 2022 Sep 2. doi: 10.5009/gnl220060. Online ahead of print.

ABSTRACT

BACKGROUND/AIMS: The discrepancies between the diagnosis of preoperative endoscopic forceps biopsy (EFB) and endoscopic submucosal dissection (ESD) in patients with early gastric neoplasm (EGN) exist objectively. Among them, pathological upgrading directly influences the accuracy and appropriateness of clinical decisions. The aims of this study were to investigate the risk factors for the discrepancies, with a particular focus on pathological upgrading and to establish a prediction model for estimating the risk of pathological upgrading after EFB.

METHODS: We retrospectively collected the records of 978 patients who underwent ESD from December 1, 2017 to July 31, 2021 and who had a final histopathology determination of EGN. A nomogram to predict the risk of pathological upgrading was constructed after analyzing subgroup differences among the 901 lesions enrolled.

RESULTS: The ratio of pathological upgrading was 510 of 953 (53.5%). Clinical, laboratorial and endoscopic characteristics were analyzed using univariable and binary multivariable logistic regression analyses. A nomogram was constructed by including age, history of chronic atrophic gastritis, symptoms of digestive system, blood high density lipoprotein concentration, macroscopic type, pathological diagnosis of EFB, uneven surface, remarkable redness, and lesion size. The C-statistics were 0.804 (95% confidence interval, 0.774 to 0.834) and 0.748 (95% confidence interval, 0.664 to 0.832) in the training and validation set, respectively. We also built an online webserver based on the proposed nomogram for convenient clinical use.

CONCLUSIONS: The clinical value of identifying the preoperative diagnosis of EGN lesions is limited when using EFB separately. We have developed a nomogram that can predict the probability of pathological upgrading with good calibration and discrimination value.

PMID:36052614 | DOI:10.5009/gnl220060

Gut Liver. 2022 Sep 2. doi: 10.5009/gnl210404. Online ahead of print.

ABSTRACT

BACKGROUND/AIMS: A full colonoscopy is currently required in children and adolescents with colorectal polyps, because of their potential of neoplastic transformation and complications such as intussusception. We aimed to analyze the associations of polyp characteristics in children and adolescents with colorectal polyps. Based on these findings, we also aimed to reevaluate the necessity of conducting a full colonoscopy.

METHODS: Pediatric patients <18 years of age who had undergone a colonoscopic polypectomy and those with <5 colorectal polyps were included in this multicenter, retrospective study. Baseline clinicodemographics, colonoscopic and histologic findings were investigated.

RESULTS: A total of 91 patients were included. Multivariate logistic regression analysis showed that polyp size was the only factor associated with the presence of any polyps located proximal to the splenic flexure (odds ratio [OR], 2.25; 95% confidence interval [CI], 1.28 to 4.28; p=0.007). Furthermore, polyp location proximal to the splenic flexure and sessile morphology were associated with the presence of any adenomatous polyp (OR, 8.51; 95% CI, 1.43 to 68.65; p=0.023; OR, 18.41; 95% CI, 3.45 to 173.81; p=0.002, respectively).

CONCLUSIONS: In children and adolescents presenting with <5 colorectal polyps, polyp size and the presence of any adenomatous polyp were positively associated with polyp location proximal to the splenic flexure. This finding supports the necessity of a full colonoscopic exam in pediatric patients with colorectal polyps for the detection of polyps before the occurrence of complications such as intussusception or neoplastic transformation.

PMID:36052612 | DOI:10.5009/gnl210404

Turk J Orthod. 2022 Sep 2. doi: 10.5152/TurkJOrthod.2022.21072. Online ahead of print.

ABSTRACT

OBJECTIVE: To comparatively evaluate the perception of patients’ soft tissue profiles treated with Herbst and Twin Block appliances and correlate the perception with cephalometric parameters.

METHODS: The record of 30 patients (15 Herbst and 15 Twin Block) treated for a period of 6 months (±1.1 months) was included in the study. A total of 60 resulting profile silhouettes (from pre- and post-functional profile photographs) were evaluated by 30 examiners and were divided into 3 groups: orthodontists, general dentists, and laypersons. The profiles were arranged in a randomized order, and the examiners rated the profiles using a visual analog scale. Paired t-test and independent t-test were performed to find a significant difference within and between the appliances, respectively. A treatment outcome correlation was done using Pearson’s correlation test between the visual analog scale scores and cephalometric parameters.

RESULTS: Within the appliances, the orthodontist perceived a difference with only the Twin Block appliance (P = .02). The general dentists perceived a significant difference with both Herbst (P = .02) and Twin Block (P = .001) appliances, whereas the laypersons did not perceive any profile improvement on treatment with functional appliances. However, between the appliances, no statistically significant profile difference was seen with all 3 groups of examiners. The ANB angle had a significant negative correlation (P = .007) to the visual analog scale scores given by the orthodontists for the Herbst appliance.

CONCLUSION: No perceptible difference was found in the profile enhancement between Herbst and Twin Block appliances with all 3 groups of examiners. The ANB angle contributed to the difference in profile perception between the appliances for the orthodontists.

PMID:36052579 | DOI:10.5152/TurkJOrthod.2022.21072