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Nevin Manimala Statistics

Single nucleotide polymorphisms within exon four of the prolactin gene and their effect on milk traits in cattle populations of Ethiopia

Anim Biotechnol. 2023 Feb 20:1-11. doi: 10.1080/10495398.2023.2176867. Online ahead of print.

ABSTRACT

Bovine prolactin (PRL) gene is essential for the initiation and maintenance of lactation and exerts multiple effects on mammary alveoli to promote the synthesis and secretion of major components of milk. The objectives of this study were to identify mutations in PRL gene and to evaluate the mutations as potential markers of milk performance traits in cattle populations of Ethiopia. For this purpose, genomic DNA from whole blood was extracted through salting out procedure from 87 animals of five cattle populations of Ethiopia. Accordingly, three single nucleotide polymorphisms (SNPs) were identified of which one SNP g.8323T > A showed missense mutation while the other two SNPs revealed silent mutations. FST values showed statistically significant genetic differentiation among the studied populations. Intermediate polymorphic information content was noted for most SNPs, which indicates the presence of sufficient genetic variation at this locus. Two SNPs showed heterozygote deficiency as a result of positive FIS values. Only g.8398A > G SNP have statistically significant (p < 0.05) effect on average daily milk yield, fat and solid not fat percentage in all studied cattle populations. Therefore, g.8398A > G SNP identified in this study influences cattle milk production and may be used as possible candidate SNP for marker-assisted selection programs in cattle populations of Ethiopia.

PMID:36803222 | DOI:10.1080/10495398.2023.2176867

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Investigation of the pharmacological, behavioral, and biochemical effects of boron in parkinson-indicated rats

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):13-21. doi: 10.14715/cmb/2022.68.8.3.

ABSTRACT

Parkinson’s disease (PD) is a progressive neurodegenerative disorder of the central nervous system. In different studies, it has been investigated that boric acid has positive effects on different mechanisms that are important in PD. The aim of our study was to investigate the pharmacological, behavioral and biochemical effects of boric acid on rats with experimental PD with Rotenone. For this purpose, Wistar-albino rats were divided into 6 groups. Only normal saline was applied subcutaneously (s.c) to the first control and sunflower oil to the second control group. Rotenone was administered (s.c) to 4 groups (groups 3-6) at a dose of 2 mg/kg for 21 days. Only rotenone (2mg/kg, s.c) was administered to the third group. Boric acid was administered intraperitoneally (i.p.) at 5 mg/kg, 10 mg/kg, and 20 mg/kg to groups 4, 5, and 6, respectively. During the study, behavioral tests were applied to the rats, and then histopathological and biochemical analyzes were performed from the sacrificed tissues. According to the data obtained, a statistically significant difference (p<0.05) was observed between the Parkinson’s group and the other groups in motor behavior tests, excluding the catalepsy test. Boric acid exhibited dose-dependent antioxidant activity. As a result of the histopathological and immunohistochemical (IHC) examination, a decrease in neuronal degeneration was observed at the increasing doses of boric acid, while gliosis and focal encephalomalacia were rarely encountered. There was a significant increase in tyrosine hydroxylase (TH) immunoreactivity, especially in group 6, with a dose of 20 mg/kg of boric acid. From these results, we conclude that the dose-dependent effect of boric acid may protect the dopaminergic system with antioxidant activity in the pathogenesis of PD. However, the effectiveness of boric acid on PD needs further investigation in a larger, more detailed study using different methods.

PMID:36800846 | DOI:10.14715/cmb/2022.68.8.3

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Expression of PD-L1 and PD-1 in stage T4 rectal cancer tissues and surrounding metastatic lymph nodes and correlation with prognosis

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):74-78. doi: 10.14715/cmb/2022.68.8.13.

ABSTRACT

The expressions of programmed death ligand 1 (PD-L1) and programmed death receptor 1 (PD-1) in T4 rectal cancer tissues and surrounding metastatic lymph nodes were analyzed and correlated with prognosis. For this purpose, ninety-eight patients with T4 rectal cancer treated in our hospital from July 2021 to July 2022 were selected, and surgically resected rectal cancer tissues as well as para carcinoma tissue samples, and surrounding metastatic lymph node tissues were obtained from all patients. Analysis of PD-L1 and PD-1 expression in rectal cancer tissues as well as in adjacent tissue specimens and surrounding metastatic lymph node tissues were performed using immunohistochemical staining. PD-L1 and PD-1 expression were analyzed in relation to lymph node metastasis, maximum tumor diameter, as well as histological analysis, and the relationship between the two and prognosis was analyzed. Immunohistochemistry for PD-L1, PD-1 revealed that both proteins were expressed in association with the target cytoplasm as well as within the cell membrane; The number of cases with positive expression of PD-L1 and PD-1 in cancer tissues was significantly higher than the number of cases with expression in adjacent tissues, which was statistically significant (P < 0.05); The expression rates of PD-L1, PD-1 in poor expression in progression-free survival as well as in progression survival were significantly higher than those in medium and high expression with statistical significance (P < 0.05); Compared with patients without lymph node metastasis, patients with T4 rectal cancer with lymph node metastasis had a higher number of cases with high expression levels of PD-L1 and PD-1 proteins, and the difference was statistically significant (P < 0.05); PD-L1 and PD-1 in T4 stage rectal cancer prognosis is closely related, distant metastasis as well as lymph node metastasis has a greater effect on PD-L1 and PD-1. PD-L1 and PD-1 showed abnormal expression in T4 rectal cancer tissues as well as in surrounding metastatic lymph nodes, and PD-L1 and PD-1 were closely related to prognosis in T4 rectal cancer, distant metastasis, as well as lymph node metastasis had a greater effect on PD-L1 and PD-1. Its detection is able to provide a certain data reference for the prognosis of T4 rectal cancer.

PMID:36800834 | DOI:10.14715/cmb/2022.68.8.13

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Expression and prognostic relevance of CRP, PCT, and ll-15 in patients with postoperative infection due to spinal injury

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):87-91. doi: 10.14715/cmb/2022.68.8.15.

ABSTRACT

C-reactive protein (CRP), procalcitonin (PCT), interleukin-15 (ll-15) expression and prognostic relevance were analyzed in patients with postoperative infection due to spinal injury. For this purpose, a total of 169 cases of spinal injury patients who underwent surgical treatment from July 2021 to July 2022 were selected, and the patients were divided into the uninfected group (148 cases), infected group (21 cases) according to the presence or absence of infection after surgery. Looking at the site of infection in both groups, the levels of CRP, PCT, and ll-15 in the two groups were detected using an enzyme-linked immunosorbent assay, and the expression of the three in postoperative infection of spinal injury and the correlation with prognosis were analyzed. Results showed that compared with the uninfected group, the infected group had higher levels of CRP, PCT, and ll-15, which were different (P < 0.05). There were no significant differences in the CRP levels between the superficial infection of the incision and the deep infection of the incision as well as other systemic infection populations at 1 d after surgery (P >0.05). CRP levels were higher in the group with deep infection of the incision as well as other systemic infections compared to the group with superficial infection at 3D and 7d after surgery (P < 0.05). There were no significant differences in the level of PCT between patients with superficial infection of the incision and those with deep infection of the incision as well as other systemic infections at 1 d after surgery (P > 0.05). The level of PCT was higher in the population with deep infection of incision as well as other systemic infections compared to the population with superficial infection at 3D and 7d after the operation (P<0.05). There were no statistically significant differences in the levels of ll-15 between patients with superficial infection of the incision and those with deep infection of the incision as well as other systemic infections at 1 D postoperatively (P>0.05). At 3D and 7d postoperatively, compared to the population with superficial incisions, the population with deep incisions as well as other systemic infections had higher levels of ll-15 with statistical significance (P < 0.05). CRP and PCT showed a positive correlation (r=7.192, P=0.001). CRP, ll-15 showed a positive correlation (r = 5.231, P = 0.001). PCT, ll-15 showed a positive correlation (r=9.029, P=0.001). CRP, PCT, ll-15 levels are closely related to postoperative infection in spinal injury. CRP, PCT, ll-15 showed high expression in postoperative infection of spinal injury and compared with the infection of the superficial part of the incision, the infection of the deep part of the incision, other systems have higher levels of CRP, PCT, ll-15. Moreover, CRP, PCT, and ll-15 were significantly associated with prognosis.

PMID:36800831 | DOI:10.14715/cmb/2022.68.8.15

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The Impact of JAK2 V617F, CALR, and MPL Mutations as Molecular Diagnostic Markers of Myeloproliferative Neoplasms in Kurdish Patients. A Single-center Experience

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):202-209. doi: 10.14715/cmb/2022.68.8.34.

ABSTRACT

Myeloproliferative neoplasms have a high prevalence and genetic mutations play a role in their occurrence. Determination of these mutations can be valuable in the screening, diagnosis, and treatment of patients. Therefore, this study was conducted to investigate the mutation of JAK2, CALR, and MPL genes as diagnostic and prognostic biomarkers in patients with myeloproliferative neoplasms in the Kurdistan region of Iraq. This case-control study was conducted in 2021 on 223 patients with myeloproliferative neoplasm referred to Hiwa Sulaymaniyah Cancer Hospital. The data were collected from three groups of Polycythemia Vera (PV) patients (70 people), Essential Thrombocythemia (ET) (50 people), and Primary Myelofibrosis (PMF) (103 people) by sampling for JAK2, CALR, and MPL gene mutation tests and demographic and clinical information have been collected through examination. The data were analyzed by SPSS v. 23 software and descriptive and chi-square statistical tests. The study included 223myeloproliferative neoplasms (MPN) patients. JAK2 V617F mutation was detected mostly in PV patients and CALR and MPL mutations in ET and PMF patients and this mutation difference was significant in prognosis and disease diagnosis. An association between JAK 2 mutation and splenomegaly was also demonstrated. Considering the lack of a definitive diagnostic method in myeloproliferative disease, the results of this study showed that molecular studies, including JAK2 V617F, CALR, and MPL mutations and other hematological tests can be useful and effective in the diagnosis of MPN. In addition, it is necessary to pay attention to new diagnostic methods.

PMID:36800830 | DOI:10.14715/cmb/2022.68.8.34

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Analysis of the mechanism regulating the killing effect of EBNA1 on EBV-associated B-cell tumors

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):92-95. doi: 10.14715/cmb/2022.68.8.16.

ABSTRACT

In order to analysis of the mechanisms regulating EBNA1 killing of EBV associated B cell tumors, preparations were first made for EBV-associated B cells, and the cells were subsequently transformed. The killing effect of ebna1-28 T cells on EBV-positive B cell lymphoid tumor cells was detected using the FACS method. SF rats were also selected to analyze the inhibitory effect of ebna1-28t on transplanted tumors in nude mice with EBV-positive B cell lymphoma. Results showed that compared with the untransfected group, the expression of EBNA1 was higher in the empty plasmid SFG group, the recombinant plasmid rv-ebna1/car group compared with the empty plasmid SFG group, and the expression of EBNA1 was higher in the untransfected group compared with the empty plasmid SFG group, which was statistically significant (P < 0.05); As shown in Figure 1, in vitro studies found that, compared to the untransfected group, the empty plasmid SFG group, the recombinant plasmid rv-ebna1/car group showed better killing efficacy on Raji cells, and the recombinant plasmid rv-ebna1/car group showed better killing efficacy on Raji cells compared to the empty plasmid SFG group; The tumor volumes of the rats in group C were larger compared with those in groups A and B, and the tumor volumes of the rats in group A were smaller compared with those in group B. The tumor volumes of the rats in group C were larger compared with those of the rats in the three groups (P<0.05). In group C, the cells were more severely invaded, and the nuclei were damaged. In group B, cell invasion in tissues was mild in the nucleus. The infection of cells in the tissues of rats in group A was better compared to groups B and C. In vitro experiments found that inhibition of EBNA1 was able to kill EBV-positive B cell lymphoid tumor cells effectively. Animal experiments found that ebna1-28t was able to shrink the volume as well as tumor weight of transplanted tumors in nude mice with EBV-positive B cell lymphoma and played a better inhibitory role.

PMID:36800829 | DOI:10.14715/cmb/2022.68.8.16

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Determination of digoxin serum level in patients with heart failure

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):102-104. doi: 10.14715/cmb/2022.68.8.18.

ABSTRACT

Heart failure is one of the common cardiovascular diseases, and digoxin is required in the list of drug treatments. Considering the positive effect of this drug on heart failure, unfortunately, its therapeutic and toxic serum levels are different and very close to each other in different people. This study aimed to investigate the digoxin serum level in heart failure patients. For this purpose, we examined 32 patients with heart failure and digoxin users in this cross-sectional descriptive study. Some important factors involved in determining digoxin toxicity, such as age, gender, creatinine, creatinine clearance, cardiac output, urea, potassium, calcium, and digoxin levels, were measured. Statistical analysis showed that digoxin serum level increases with age (p<0.01). The increase in digoxin serum level was related to urea, creatinine, and potassium serum levels (p<0.01). In general, it seems that to prevent the increase of digoxin serum level and poisoning with it, it is necessary to continuously control the serum level of this drug in the form of serum measurement or according to its clearance.

PMID:36800827 | DOI:10.14715/cmb/2022.68.8.18

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Evaluating the effect of nurses’ supportive and educational care on GATA2 gene expression and quality of life in patients with endometriosis

Cell Mol Biol (Noisy-le-grand). 2022 Aug 31;68(8):145-150. doi: 10.14715/cmb/2022.68.8.26.

ABSTRACT

Endometriosis is one of the women’s aggressive but benign diseases, formed by the presence of endometrial glands and stroma outside the uterine cavity. Various genes, including the GATA2 gene, are involved in the pathogenesis of endometriosis. Since this disease affects patients’ quality of life, this study was conducted to investigate the effect of nurses’ supportive and educational care on the quality of life of endometriosis patients and its role in GATA2 gene expression. For this purpose, 45 patients with endometriosis participated in this research, a semi-experimental before-and-after study. The instrument used was demographic information and quality of life questionnaires affiliated with Beckman Institute, which were completed in two stages before and after implementing patient training and support sessions. The real-time PCR technique was also used to evaluate the expression level of the GATA2 gene after obtaining endometrial tissue from patients before and after the intervention. Finally, the received information was analyzed using SPSS software and statistical tests. Based on the obtained results, the average quality of life score before the intervention was 51.73±13.91, and after the intervention was 60.46±13.80 (P<0.001). Also, in all four dimensions of quality of life, patients’ average scores increased after the intervention compared to before the intervention. Still, this difference was significant only in the two dimensions of physical and mental health (P<0.001). GATA2 gene expression before intervention was 0.35 ± 0.13 among endometriosis patients. After the intervention, its amount reached about three times, i.e., 0.96 ± 0.32, which showed a significant difference between the two groups at the 5% probability level. In general, the results of this research confirmed the positive effect of educational and support programs in improving the quality of life of breast cancer patients. Therefore, it is suggested to design and implement such programs in a broader manner and based on patients’ educational and support needs.

PMID:36800818 | DOI:10.14715/cmb/2022.68.8.26

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Postoperative analgesia after surgical repair of distal radius fracture: a randomized comparison between distal peripheral nerve blockade and surgical site infiltration

Minerva Anestesiol. 2023 Feb 21. doi: 10.23736/S0375-9393.23.16956-2. Online ahead of print.

ABSTRACT

BACKGROUND: Pain following open reduction and internal fixation of distal radius fracture (DRF) can be significant. This study compared the intensity of pain up to 48 hours after volar plating for DRF, associated to either an ultrasound guided distal nerve block (DNB) or surgical site infiltration (SSI).

METHODS: In this prospective single blind randomized study, 72 patients scheduled for DRF surgery under 1.5% lidocaine axillary block were allocated to receive, at the end of surgery, either an ultrasound-guided median and radial nerves block with ropivacaine 0.375% (DNB) performed by the anesthesiologist or a SSI with the same drug regimen, performed by the surgeon. Primary outcome was the duration between analgesic technique (H0) and pain reappearance (Numerical Rating Scale (NRS 0-10)>3). Secondary outcomes were the quality of analgesia, the quality of sleep, the magnitude of motor blockade, and the patient satisfaction. The study was built on a statistical hypothesis of equivalence.

RESULTS: Fifty-nine patients were included in the final per-protocol analysis (DNB=30, SSI=29). Time to reach NRS>3 was (in median [95%CI]) 267 min [155;727] and 164 min [120;181] respectively after DNB and SSI (difference=103 min [-22;594] – rejection of equivalence hypothesis). Pain intensity throughout the 48 hours, quality of sleep, opiate consumption, motor blockade and patient satisfaction was not significantly different between groups.

CONCLUSIONS: Although DNB provides a longer analgesia than SSI, both techniques gave comparable level of pain control during the first 48 hours after surgery, without any difference in the incidence of side effects or patient satisfaction.

PMID:36800809 | DOI:10.23736/S0375-9393.23.16956-2

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Ultrasonographic assessment of metoclopramide effect on gastric volume in parturients females undergoing Caesarean section: a randomized double blind study

Minerva Anestesiol. 2023 Feb 21. doi: 10.23736/S0375-9393.22.16913-0. Online ahead of print.

ABSTRACT

BACKGROUND: The prokinetic effect of metoclopramide promotes gastric emptying and decreases stomach capacity. The aim of the present study was to assess the efficacy of metoclopramide in reducing gastric contents and volume using gastric point-of-care ultrasonography (PoCUS) in parturients females prepared for elective Cesarean section under general anesthesia.

METHODS: A total of 111 parturient females were randomly allocated to one of two groups. The intervention group (Group M; N.=56) received 10 mg metoclopramide diluted in 10 mL 0.9% normal saline. The control group (Group C; N.=55): received 10 mL 0.9% normal saline. The cross-sectional area and volume of stomach contents were measured using ultrasound before and one hour after the administration of metoclopramide or saline.

RESULTS: Statistically significant differences in mean antral cross-sectional area and gastric volume were observed between the two groups (P<0.001). Group M had significantly lower rates of nausea and vomiting compared to the control group.

CONCLUSIONS: Metoclopramide decreases gastric volume, reduces postoperative nausea and vomiting, and may lower the risk of aspiration when used as premedication before obstetric surgery. Preoperative gastric PoCUS has utility in objectively assessing stomach volume and contents.

PMID:36800808 | DOI:10.23736/S0375-9393.22.16913-0