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Nevin Manimala Statistics

Machine Learning Models for Mortality Prediction in Intensive Care Unit Patients With Ischemic Stroke Associated With Intracranial Artery Stenosis: Retrospective Cohort Study

JMIR Cardio. 2026 Feb 24;10:e82042. doi: 10.2196/82042.

ABSTRACT

BACKGROUND: Mortality prediction in intensive care unit (ICU) patients with ischemic stroke complicated by intracranial artery stenosis or occlusion remains difficult. Conventional scoring systems often lack discriminatory power and fail to provide individualized risk estimates. Machine learning approaches have been increasingly explored to integrate diverse clinical features for prognostic modeling.

OBJECTIVE: This study aims to develop and evaluate machine learning models for individualized mortality prediction in ICU patients with ischemic stroke associated with intracranial artery stenosis or occlusion.

METHODS: Using the Medical Information Mart for Intensive Care IV (MIMIC-IV) database, we conducted a retrospective cohort study including 5280 adult ICU patients identified through International Classification of Diseases, Ninth and Tenth Revision (ICD-9/10) codes. Mortality status was determined based on the presence of a recorded date of death (dod) in the MIMIC-IV database. Patients with a documented dod were classified as deceased, whereas those without a recorded dod were classified as nondeceased. The primary outcome was all-cause mortality as recorded in the MIMIC-IV database, defined by the presence of a documented dod. Patients were randomly split into training (n=3696, 70%) and testing (n=1584, 30%) cohorts. Missing value imputation, correlation reduction, and multistep supervised feature selection (gradient boosting, BorutaShap, recursive feature elimination with cross-validation, LassoCV, and chi-square analysis) were performed exclusively within the training set and subsequently applied to the test set, resulting in 35 retained predictive features. Eight machine learning models-including light gradient boosting machine (LightGBM), Bagging (bootstrap aggregating), random forest, logistic regression, support vector machine, gradient boosting, adaptive boosting, and k-nearest neighbors-were trained with hyperparameter optimization using RandomizedSearchCV. Model performance was evaluated using area under the curve, accuracy, recall, precision, F1-score, and calibration curves. Shapley additive explanations were used for global and individual-level interpretability.

RESULTS: LightGBM, Bagging, and logistic regression demonstrated comparable discrimination, achieving an area under the curve of approximately 0.82-0.83 and accuracy above 73% on the independent test set. LightGBM demonstrated balanced performance (recall 0.70; precision 0.72) and good calibration. Shapley additive explanations analysis identified acute physiology score III, suspected infection, Charlson comorbidity index, age, weight on admission, and red cell distribution width as the most influential predictors. Overall, higher physiological severity, greater comorbidity burden, and older age were consistently associated with increased observed mortality risk.

CONCLUSIONS: Machine learning models-including LightGBM and Bagging-provide interpretable predictions of all-cause mortality in ICU patients with ischemic stroke and intracranial arterial disease. These models highlight key prognostic features and may support mortality risk stratification. External validation and evaluation of workflow integration are warranted before clinical implementation.

PMID:41734354 | DOI:10.2196/82042

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Nevin Manimala Statistics

Disparities in Antiemetic Prophylaxis Care Processes Predicted by Patient Neighborhood: Retrospective Cohort and Geospatial Analysis

JMIR Public Health Surveill. 2026 Feb 24;12:e69133. doi: 10.2196/69133.

ABSTRACT

BACKGROUND: Social determinants of health continue to drive persistent disparities in perioperative care. Our team has previously demonstrated racial and socioeconomic disparities in perioperative processes, notably in the administration of antiemetic prophylaxis, in several large perioperative registries. Given how neighborhoods are socially segregated in the United States, we examined geospatial clustering of perioperative antiemetic disparities.

OBJECTIVE: The study aimed to determine whether disparities in perioperative antiemetic prophylaxis exhibit geographic clustering based on neighborhood-level disadvantage and whether patients from disadvantaged communities are more likely to be undertreated after adjusting for individual postoperative nausea and vomiting risk.

METHODS: We conducted a retrospective cohort study of anesthetic records from the University of Utah Hospital involving 19,477 patients who met the inclusion criteria. We geocoded patient home addresses and combined them with the census block group-level neighborhood disadvantage, a composite index from the National Neighborhood Data Archive. We stratified our patients by antiemetic risk score and calculated the number of antiemetic interventions. We used Poisson spatial scan statistics, implemented in SaTScan (Information Management Services, Inc), to detect geographic clusters of undertreatment.

RESULTS: We identified 1 significant cluster (P<.001) of undertreated perioperative antiemetic prophylaxis cases. The relative risk of the whole cluster was 1.44, implying that patients within the cluster were 1.44 times more likely to receive fewer antiemetics after controlling for antiemetic risk. Patients from more disadvantaged neighborhoods were more likely to receive below-median antiemetic prophylaxis after controlling for risk.

CONCLUSIONS: To our knowledge, this is the first geospatial cluster analysis of perioperative process disparities; we leveraged innovative geostatistical methods and identified a spatially defined, geographic cluster of patients whose home address census-tract level neighborhood deprivation index predicted disparities in risk-adjusted antiemetic prophylaxis.

PMID:41734334 | DOI:10.2196/69133

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Nevin Manimala Statistics

Diagnostic value of ultrasound parameters combined with clinical features in children with alveolar and non- alveolar rhabdomyosarcoma

Med Ultrason. 2026 Feb 12. doi: 10.11152/mu-4589. Online ahead of print.

ABSTRACT

AIMS: The aim of this study was to investigate the differences in clinical and ultrasound findings between alveolar rhabdomyosarcoma (ARMS) and non-ARMS in order to improve the accuracy of preoperative diagnosis of ARMS in children.

MATERIAL AND METHODS: A retrospective study of 33 children with pathologically confirmed RMS (ARMS and non-ARMS groups) was realized. Clinical features and ultrasound parameters were compared between ARMS and non-ARMS using Fisher ‘s exact test analysis. Receiver operating characteristic (ROC) curves and area under the curve (AUC) were used to represent diagnostic performance.

RESULTS: Among the clinical features, there were statistically significant differences between ARMS and non-ARMS groups in site (p=0.020), TNM stage (p=0.007), IRS stage (p=0.009), risk grade (p=0.011), and distant metastasis (p=0.020). There were statistical differences in necrosis (p= p0.039) and central hyperechoic fiber bundles (p<0.001) between the two groups. The combination of ultrasound and clinical characteristics demonstrated excellent predictive ability (AUC was 0.964).

CONCLUSIONS: Children with ARMS more often present with poor prognosis, and combined clinical and ultrasound features are helpful for preoperative identification of ARMS and providing imaging evidence for accurate clinical diagnosis and treatment.

PMID:41734302 | DOI:10.11152/mu-4589

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Nevin Manimala Statistics

Value of two-point Dixon water-only Look-Locker T1 mapping on the assessment of liver fibrosis in chronic liver disease with hepatic steatosis

Br J Radiol. 2026 Feb 24:tqag044. doi: 10.1093/bjr/tqag044. Online ahead of print.

ABSTRACT

OBJECTIVES: To evaluate the influence of fat on the assessment of liver fibrosis in chronic liver disease using two-point Dixon water-only Look-Locker T1 mapping by comparing water-only derived sequence (W-Dixon) with in-phase (IP) and opposed-phase (OP)-based sequences.

METHODS: 2.89-T MRI included 2D two-point Dixon Look-Locker T1 mapping and proton density fat fraction (PDFF) mapping. The correlations between liver T1 values and PDFF were assessed using Spearman correlation coefficient. T1 values on each T1 map were compared among three FIB-4 index range groups (FIB-4 < 1.3, 1.3-2.67, > 2.67) in patients with and without hepatic steatosis using one-way analysis of variance and Kruskal-Wallis test.

RESULTS: 204 patients with chronic liver disease were retrospectively evaluated. T1 values on IP or OP images were significantly correlated with PDFF (r = -0.373, 0.220), while no significant correlation was found between T1 values on W-Dixon images and PDFF (r = -0.071). In patients without hepatic steatosis, T1 values on each T1 map in FIB-4 > 2.67 group were significantly higher than in FIB-4 1.3-2.67 group (p < 0.01). Conversely, in patients with hepatic steatosis, only W-Dixon sequence statistically differentiated FIB-4 > 2.67 group from FIB-4 1.3-2.67 group based on T1 values (p < 0.05).

CONCLUSIONS: The assessment of liver fibrosis based on T1 values obtained by Dixon water-only T1 mapping was less influenced by the presence of fat.

ADVANCES IN KNOWLEDGE: Two-point Dixon water-only Look-Locker T1 mapping minimizes the confounding effect of fat, enabling proper assessment of liver fibrosis in steatotic chronic liver disease.

PMID:41734280 | DOI:10.1093/bjr/tqag044

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Nevin Manimala Statistics

Longitudinal pain intensity and interference symptomatology in mild traumatic brain injury: a TRACK-TBI study

Pain. 2025 Nov 19. doi: 10.1097/j.pain.0000000000003869. Online ahead of print.

ABSTRACT

An estimated 50% to 75% of patients with mild traumatic brain injury (mTBI) report chronic pain. Symptomatology evolution, subtypes, and risk factors remain poorly understood. We evaluated patient-reported pain intensity and interference with daily function in a longitudinal U.S. mTBI cohort. The Transforming Research and Clinical Knowledge in Traumatic Brain Injury Study prospectively enrolled patients with TBI across 18 trauma centers who received head computed tomography (CT) within 24 hours post-injury. Subjects aged ≥17 years with arrival Glasgow Coma Scale = 13 to 15, Marshall CT Score = 1 to 2, and PROMIS-Pain Intensity and Interference assessments at 2 weeks, 3 months, 6 months, and 12 months post-injury were included. Subjects with cranial surgery, major extracranial injury, or pre-injury musculoskeletal pain were excluded. Healthy controls (HCs) completed assessments at all timepoints. Pain assessment T-scores were compared using mixed-effect linear regressions. Adjusted mean differences (aMDs; [95% confidence intervals]) were reported. In 906 subjects (mTBI = 710, HC = 196), mean age was 39.6 ± 16.7-years, 64% were male, and 75% were White/Caucasian. In subjects with mTBI, 35% were CT positive, ≥80% reported pain intensity or interference symptoms at 2 weeks post-injury, and <20% received TBI care postdischarge. Compared with HCs, CT-negative subjects had statistically elevated pain intensity (aMD; 2 weeks: +12.8 [10.9-14.6], 3 months: +4.6 [2.7-6.6], 6 months: +3.4 [1.4-5.4], 12 months: +2.7 [0.7-4.7]) and interference (aMD; 2 weeks: +12.3 [10.7-13.9], 3 months: +4.6 [3.0-6.2], 6 months: +3.1 [1.4-4.8], 12 months: +2.1 [0.4-3.8]). Similarly vs HCs, CT-positive subjects had statistically elevated pain intensity (aMD; 2 weeks: +12.5 [10.4-14.6], 3 months: +3.8 [1.7-5.9], 6 months: +2.8 [0.6-5.0], 12 months: +2.4 [0.2-4.6]) and interference (aMD; 2 weeks: +11.7 [9.9-13.5], 3 months: +4.0, [2.2-5.8], 6 months: +2.9 [1.1-4.7], and 12 months: +2.2 [0.3-4.0]). Pain intensity and daily interference symptoms remained longitudinally elevated in patients with mTBI. The majority did not receive follow-up care for TBI, underscoring opportunities for preventative and therapeutic interventions.

PMID:41734261 | DOI:10.1097/j.pain.0000000000003869

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Nevin Manimala Statistics

Normative Ranges for Wideband Middle Ear Muscle Reflex Magnitude: Limited Potential for Diagnosing Cochlear Deafferentation

Am J Audiol. 2026 Feb 24:1-15. doi: 10.1044/2025_AJA-25-00241. Online ahead of print.

ABSTRACT

PURPOSE: Cochlear synaptopathy, the loss of the synapses between the inner hair cells and their auditory nerve fiber targets, is expected to be a common type of auditory deficit resulting from noise exposure or aging. Unfortunately, there is currently no means for diagnosing cochlear synaptopathy or other forms of cochlear deafferentation. Wideband middle ear muscle reflexes (MEMRs) have been proposed as a potential diagnostic indicator of cochlear deafferentation, but we lack normative ranges for MEMR magnitude. The objective of this study was to develop normative ranges for wideband MEMR magnitude that can be used to identify patients with abnormally weak MEMRs.

METHOD: Normative ranges were generated for ipsilateral and contralateral wideband MEMR magnitude in a population at low risk for cochlear synaptopathy due to young age, normal hearing thresholds, and minimal noise exposure history. The normative ranges were statistically adjusted for average distortion product otoacoustic emission (DPOAE) levels to account for possible impacts of outer hair cell dysfunction. To evaluate the ability of the normative ranges to differentiate between populations at low versus high risk of synaptopathy, measurements were also collected from military Veterans with normal hearing thresholds who reported at least one of the auditory complaints predicted to result from synaptopathy-tinnitus, speech perception in noise difficulty, or decreased sound tolerance.

RESULTS: For individuals with poorer DPOAEs, it is not possible to fall below the lower bounds of the wideband MEMR normative ranges. For individuals with more robust DPOAEs, the lower bounds are very close to an MEMR magnitude indicating an absent reflex. Few individuals from the high-risk sample fell below the normative ranges, suggesting that these normative ranges do not identify significant cochlear deafferentation as expected.

CONCLUSION: Wideband MEMR magnitude normative ranges will not be effective as a stand-alone indicator of cochlear deafferentation.

PMID:41734241 | DOI:10.1044/2025_AJA-25-00241

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Nevin Manimala Statistics

The new rank-based concentration index: Further analysis and properties

PLoS One. 2026 Feb 24;21(2):e0343034. doi: 10.1371/journal.pone.0343034. eCollection 2026.

ABSTRACT

Additional properties and generalizations are explored for a recently introduced concentration index CK. The CK is based on both the distribution of a set of proportions (probabilities) as well as their ranks. The CK is closely related to and proposed as a preferred alternative to the widely used Q that equals the sum of quadratic terms (proportions). Besides the use of CK and Q as measures of market or industry concentration, with the proportions being market shares, CK or its potential transformations can be used as alternative measures in a variety of real measurement situations for which Q has been applied. The extended analysis of CK includes the proof that CK is a convex function, which makes it capable of decomposition analysis. The sensitivity and transfer effect of CK due to changes in the distribution of the proportions is studied. Derivation is given for the so-called numbers equivalent of CK and for its probability interpretation. Generalizations of CK are considered for changing the relative emphasis of the component proportions. Randomly generated distributions exemplify the limited effect on CK from excluding the smallest proportions that are often unavailable in real situations. Numerical comparisons between CK and other concentration indices are presented for a wide variety of firms or industries. A statistical inference procedure is presented for appropriate situations.

PMID:41734214 | DOI:10.1371/journal.pone.0343034

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Nevin Manimala Statistics

Taking a closer look: Can an app improve diagnostic accuracy in urgent care? Cluster-randomized interventional trial DASI

PLOS Digit Health. 2026 Feb 24;5(2):e0001252. doi: 10.1371/journal.pdig.0001252. eCollection 2026 Feb.

ABSTRACT

In urgent care settings, efficient medical history-taking is paramount for making timely and accurate treatment decisions. Medical history-taking apps have emerged as a means to streamline this process but their effectiveness in enhancing diagnostic accuracy remains unclear. We aimed to investigate whether using a medical history-taking app before consultation improves diagnostic accuracy. In two German out-of-hours practices (OOHP), patients were recruited over a 12-months period. Within each practice, weeks were randomized to either an intervention or control group, resulting in a cluster-randomized trial (CRT) with clustering in weeks within the same practice. Patients in the intervention group used an app to report their complaints before their consultation, enabling physicians to review their medical history details beforehand. In contrast, patients in the control group used the app after their consultation, and no summary of their medical history was available to the physician. Diagnostic accuracy was defined as the agreement between the OOHP physician’s diagnoses and those determined by an expert committee (EC) after reviewing patient files. As a secondary outcome, we compared OOHP and EC physicians’ treatment recommendations against patients’ self-reported actual treatment (e.g., specialist care, hospital admissions) from a follow-up survey. We analyzed data from 986 patients and found no significant intervention effect on diagnostic accuracy (Odds Ratio 0.94 (95%CI 0.73 – 1.21), 57.6% in intervention vs 59.1% in control group). Additionally, the app had no significant effect on the prediction of further treatment. The only significant factors affecting these outcomes were the number of diagnoses (positively associated with diagnostic accuracy) and a self-reported severe condition (associated with higher likelihood of requiring further treatment). Individual differences between physicians were more pronounced than those between the intervention and control group for the secondary outcome. The study’s findings suggest that this medical history-taking app does not enhance diagnostic accuracy in urgent care settings.

PMID:41734202 | DOI:10.1371/journal.pdig.0001252

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Nevin Manimala Statistics

Antibiotic stewardship benchmarking-Using the WHO point prevalence survey of antimicrobial prescribing in a Tertiary Care Public Hospital, Karachi

PLoS One. 2026 Feb 24;21(2):e0342985. doi: 10.1371/journal.pone.0342985. eCollection 2026.

ABSTRACT

BACKGROUND: Antimicrobial resistance (AMR) is a global threat, mainly linked to inappropriate use and prescription of antibiotics, Antimicrobial stewardship (AMS) programs have proved to promote responsible antibiotic use and decrease the burden of AMR. The aim of this study is to benchmark antibiotic prescribing patterns and evaluate stewardship practices using the World Health Organization (WHO) Point Prevalence Survey (PPS) methodology in a tertiary care public sector hospital in Karachi.

METHOD: A cross-sectional, prospective PPS was conducted over four weeks in July 2024 at Dow University Hospital, Karachi. The data were extracted from the medical records of the patients using a validated WHO PPS tool by a trained infectious disease physician and pharmacist. All inpatients admitted before or at 8:00 a.m. on survey day, without a planned discharge were included, excluding those from emergency, acute care, day-care surgery, dialysis, and oncology units. Descriptive analysis of the data was performed using Stata version 14.

RESULTS: Out of 224 hospitalized patients at the day of survey, 186 inpatients (adults and children across medical, surgical and critical care wards) were included in the study meeting the inclusion criteria. The study included 50.5% male and 49.5% females, having mean age of 45 (±18) years. The point prevalence of antibiotic use was 83.3% (95% CI: 77.5-88.2%). Community-acquired infections 55.5% (95% CI: 48.7-62.1%) were the most common indication of use. Most antibiotics 99.2%, (95% CI: 95.6-99.9%) were prescribed empirically, with predominant parenteral administration 89.2% (95% CI: 84.5-92.9%) and limited Intravenous-to-oral switch 2.9% (95% CI: 1.3-6.2%). Ceftriaxone (18.5%), piperacillin-tazobactam (18.1%), and meropenem (16.2%) were most frequently used antibiotics. According to WHO Access, Watch and Reserve (AWaRe) classification, 80.8% (95% CI: 75.2-85.6%) of antibiotics belonged to the ‘Watch’ category, 17.3% (95% CI: 12.6-23.2%) to ‘Access’, and 1.8% (95% CI: 0.7-4.6%) to ‘Reserve’. Cultures showed no growth in 64.8% (95% CI: 55.2-73.6%) of cases. Stewardship interventions were found applicable in 55.4% (95% CI: 48.7-62.0%) of prescriptions due to overuse, dosing errors, and absence of antimicrobial guideline in the hospitals.

CONCLUSION: This study demonstrates that antibiotic utilization exceeded global averages, highlighting the urgent need to develop institutional antimicrobial guidelines, enhance stewardship programs, and improve diagnostic stewardship to curb AMR.

PMID:41734200 | DOI:10.1371/journal.pone.0342985

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Nevin Manimala Statistics

Comprehensive analysis of the potential effect and mechanism of pyroptosis-related genes in treatment-related myeloid tumors

PLoS One. 2026 Feb 24;21(2):e0343525. doi: 10.1371/journal.pone.0343525. eCollection 2026.

ABSTRACT

Treatment-related myeloid neoplasms (t-MN) represent a severe complication of cancer therapy, characterized by poor prognosis and limited treatment options. This study presents a preliminary, exploratory bioinformatic analysis aimed at characterizing the expression landscape and potential regulatory roles of pyroptosis-related genes (PRGs) in a murine model of t-MN. Utilizing RNA-seq data (GEO: GSE135866), differential expression analysis identified 1286 DEGs. Cross-referencing 367 curated mouse PRGs revealed 46 pyroptosis-related DEGs (PRDEGs). Functional enrichment analysis (GO, KEGG) showed these PRDEGs are significantly involved in autophagy, inflammatory regulation, apoptosis, NOD-like receptor signaling, and the AMPK pathway. GSEA associated the broader gene set with PI3K-Akt and Notch signaling. Protein-protein interaction network analysis identified five critical hub genes: Trp53, Mtor, Gpx3, Foxo3, and Cybb. ROC curve analysis confirmed these hub genes exhibit significant differential expression and high diagnostic accuracy (AUC > 0.9) in distinguishing t-MN from controls. Furthermore, immunoinfiltration analysis (CIBERSORT) revealed significant differences in immune cell composition between t-MN and control samples and identified notable correlations between hub gene expression and specific immune cell abundances. Importantly, given the limited sample size and the use of murine bone marrow data, the statistical findings should be interpreted strictly at the exploratory and hypothesis-generating level. This study does not support definitive biological conclusions or causal inferences but rather aims to delineate the pyroptosis-related molecular profile in a preclinical t-MN model. The results are intended to inform and guide future investigations-including validation in larger cohorts, independent experimental models, and human clinical samples-to assess the translational potential of these candidate biomarkers and therapeutic targets.

PMID:41734196 | DOI:10.1371/journal.pone.0343525