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Nevin Manimala Statistics

Predicting neuroimaging eligibility for extended-window endovascular thrombectomy

J Neurosurg. 2021 Feb 26:1-5. doi: 10.3171/2020.8.JNS20386. Online ahead of print.

ABSTRACT

OBJECTIVE: Endovascular thrombectomy (EVT) and tissue plasminogen activator (tPA) are effective ischemic stroke treatments in the initial treatment window. In the extended treatment window, these treatments may offer benefit, but CT and MR perfusion may be necessary to determine patient eligibility. Many hospitals do not have access to advanced imaging tools or EVT capability, and further patient care would require transfer to a facility with these capabilities. To assist transfer decisions, the authors developed risk indices that could identify patients eligible for extended-window EVT or tPA.

METHODS: The authors retrospectively identified stroke patients who had concurrent CTA and perfusion and evaluated three potential outcomes that would suggest a benefit from patient transfer. The first outcome was large-vessel occlusion (LVO) and target mismatch (TM) in patients 5-23 hours from last known normal (LKN). The second outcome was TM in patients 5-15 hours from LKN with known LVO. The third outcome was TM in patients 4.5-12 hours from LKN. The authors created multivariable models using backward stepping with an α-error criterion of 0.05 and assessed them using C statistics.

RESULTS: The final predictors included the National Institutes of Health Stroke Scale (NIHSS), the Alberta Stroke Program Early CT Score (ASPECTS), and age. The prediction of the first outcome had a C statistic of 0.71 (n = 145), the second outcome had a C statistic of 0.85 (n = 56), and the third outcome had a C statistic of 0.86 (n = 54). With 1 point given for each predictor at different cutoffs, a score of 3 points had probabilities of true positive of 80%, 90%, and 94% for the first, second, and third outcomes, respectively.

CONCLUSIONS: Despite the limited sample size, compared with perfusion-based examinations, the clinical variables identified in this study accurately predicted which stroke patients would have salvageable penumbra (C statistic 71%-86%) in a range of clinical scenarios and treatment cutoffs. This prediction improved (C statistic 85%-86%) when utilized in patients with confirmed LVO or a less stringent tissue mismatch (TM < 1.2) cutoff. Larger patient registries should be used to validate and improve the predictive ability of these models.

PMID:33636705 | DOI:10.3171/2020.8.JNS20386

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A propensity-adjusted comparison of middle meningeal artery embolization versus conventional therapy for chronic subdural hematomas

J Neurosurg. 2021 Feb 26:1-6. doi: 10.3171/2020.9.JNS202781. Online ahead of print.

ABSTRACT

OBJECTIVE: Middle meningeal artery (MMA) embolization is a promising treatment strategy for chronic subdural hematomas (cSDHs). However, studies comparing MMA embolization and conventional therapy (surgical intervention and conservative management) are limited. The authors aimed to compare MMA embolization versus conventional therapy for cSDHs using a propensity-adjusted analysis.

METHODS: A retrospective study of all patients with cSDH who presented to a large tertiary center over a 2-year period was performed. MMA embolization was compared with surgical intervention and conservative management. Neurological outcome was assessed using the modified Rankin Scale (mRS). A propensity-adjusted analysis compared MMA embolization versus surgery and conservative management for all individual cSDHs. Primary outcomes included change in hematoma diameter, treatment failure, and complete resolution at last follow-up.

RESULTS: A total of 231 patients with cSDH met the inclusion criteria. Of these, 35 (15%) were treated using MMA embolization, and 196 (85%) were treated with conventional treatment. On the latest follow-up, there were no statistically significant differences between groups in the percentage of patients with worsening mRS scores. Of the 323 total cSDHs found in 231 patients, 41 (13%) were treated with MMA embolization, 159 (49%) were treated conservatively, and 123 (38%) were treated with surgical evacuation. After propensity adjustment, both surgery (OR 12, 95% CI 1.5-90; p = 0.02) and conservative therapy (OR 13, 95% CI 1.7-99; p = 0.01) were predictors of treatment failure and incomplete resolution on follow-up imaging (OR 6.1, 95% CI 2.8-13; p < 0.001 and OR 5.4, 95% CI 2.5-12; p < 0.001, respectively) when compared with MMA embolization. Additionally, MMA embolization was associated with a significant decrease in cSDH diameter on follow-up relative to conservative management (mean -8.3 mm, 95% CI -10.4 to -6.3 mm, p < 0.001).

CONCLUSIONS: This propensity-adjusted analysis suggests that MMA embolization for cSDH is associated with a greater extent of hematoma volume reduction with fewer treatment failures than conventional therapy.

PMID:33636706 | DOI:10.3171/2020.9.JNS202781

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Ultra performance liquid chromatography-tandem mass spectrometry assay for the quantification of RNA and DNA methylation

J Pharm Biomed Anal. 2021 Feb 15;197:113969. doi: 10.1016/j.jpba.2021.113969. Online ahead of print.

ABSTRACT

Previous studies have reported that nucleic acid methylation is a critical element in cardiovascular disease, and most studies mainly focused on sequencing and biochemical research. Here we developed an Ultra performance liquid chromatography-tandem mass spectrometry (UPLC-MS/ MS) method for the quantification analysis of the dissociative epigenetic modified nucleosides (5mdC, 5mrC, m6A) in Myocardial Infarction (MI) SD rats from different periods (1 week, 4 weeks, 8 weeks) after the surgery. The samples for analysis were obtained from heart tissue and blood of the rats. All the quantification results are compared with the sham-operated group. Total RNA and DNA were isolated by enzymatic hydrolytic methods before the UPLC-MS/MS analysis. The statistical analysis demonstrates the dynamic changes of modified nucleosides in MI rats, and it showed good specificity, accuracy, stability and less samples were needed in the method. In this paper, we discovered that the concentration of 5mdC, 5mrC, m6A from heart tissue significantly increased at 8 weeks after the surgery. Furthermore, UPLC-MS/MS helps us observe the similar change of the concentration of those 3 methylated biomarkers in peripheral blood after 8 weeks. The result shows that the dynamic process of those 3 methylated biomarkers in peripheral blood is related to the content of methylated biomarkers from the heart tissue. Based on the scientific evidence available, we proved that the methylation of genetic materials in peripheral blood is similar to myocardial infarction tissue. The relation between them indicates that peripheral blood could be a promising alternative to the heart tissue which monitor the level of methylation and MI diagnosis-aided.

PMID:33636646 | DOI:10.1016/j.jpba.2021.113969

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Basic science course grades predict success in the Israel mandatory nursing certification test among students enrolled in a second career program

Nurse Educ Today. 2021 Feb 20;99:104818. doi: 10.1016/j.nedt.2021.104818. Online ahead of print.

ABSTRACT

BACKGROUND: With the constant urgent need to meet the demands of the future workforce, nursing education institutes are under increasing pressure to graduate more quality students. One way to achieve higher numbers of graduates would be to identify factors that predict nursing students’ academic success. No reports of such predictors were found for students in accelerated programs for non-nursing Bachelor’s degree graduates.

OBJECTIVES: This study was designed to examine the relationships between demographic characteristics, course grades in basic science and medical-surgical courses, and the final scores achieved by students in the Israel mandatory RN certification test.

DESIGN, SETTINGS, AND PARTICIPANTS: 164 students, enrolled in four courses of a second career in nursing program (accelerated program) in an academic nursing school in central Israel, participated in this retrospective study.

METHODS: Socio-demographic data and the final grades for basic science courses (chemistry and biochemistry, microbiology, anatomy and physiology, pathology, and pharmacology), the major Medical-Surgical course, and the RN certification test, were collected from the institutional database and analyzed.

RESULTS: Positive correlations were found between the mandatory RN certification test score, and the final grades of all the studies except the pathology course and Medical-Surgical course. The final RN certification test score was predicted by the final grades, with anatomy and physiology (p < 0.001), and pharmacology (p < 0.003), explaining 40% of the variance of the dependent variable. There were no statistical effects of demographic variables.

CONCLUSIONS: Early evaluation and prediction of academic success for nursing students in the second career program may guide effective interventions designed to promote students’ skills and improve their ability to complete the mandatory RN certification test successfully.

PMID:33636651 | DOI:10.1016/j.nedt.2021.104818

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Practice expectations for Australian graduate emergency nursing programs: A Delphi study

Nurse Educ Today. 2021 Feb 10;99:104811. doi: 10.1016/j.nedt.2021.104811. Online ahead of print.

ABSTRACT

BACKGROUND: Practice standards in nursing provide minimum expectations to enable the provision of high quality and safe care. There are currently no practice standards for post-registration graduate emergency nursing programs in Australia, leading to variation in graduate attributes and clinical expectations on completion of their program.

OBJECTIVES: The aim of this study was to establish consensus-based practice standards for graduate emergency nursing programs in Australia.

DESIGN: Delphi approach.

PARTICIPANTS: Australian nurses who identified as an emergency nurse and currently worked, or previously worked, in an emergency care environment.

METHODS: A modified two-round Delphi method was used. The survey was divided into four sections of data collection, including demographics, graduate emergency nursing course entry requirements, graduate expectations, and clinical care capabilities. Data were analysed using descriptive statistics including calculation of content validity index (CVI).

RESULTS: There were 204 respondents in Round One and 153 respondents in Round Two. Respondents agreed that nurses wanting to undertake graduate studies in emergency nursing require prior experience in the emergency care environment and should be working a minimum of 0.5 full time equivalent (FTE) whilst completing their studies. Thirty-nine statements presented under graduate attributes achieved a CVI of >0.8. All 70 clinical care capability statements presented in Round Two achieved a CVI of >0.8.

CONCLUSION: This study generated the evidence to establish minimum practice standards for Australian graduate emergency nursing programs. The standards centre around three key areas: graduate entry requirements, graduate attributes and clinical care capabilities. The standards provide a clear guide for employers, educators and clinicians, and inform capabilities for early career emergency nurses.

PMID:33636653 | DOI:10.1016/j.nedt.2021.104811

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Spatial heterogeneity assessment of factors affecting sewer pipe blockages and predictions

Water Res. 2021 Feb 15;194:116934. doi: 10.1016/j.watres.2021.116934. Online ahead of print.

ABSTRACT

Efficient management of sewer blockages requires increased preventive maintenance planning. Conventional approaches to the management of blockages in sewer pipe networks constitute largely unplanned maintenance stemming from a lack of adequate information and diagnosis of blockage causative mechanisms. This study mainly investigated a spatial statistical approach to determine the influence of explanatory factors on increased blockage propensity in sewers based on spatial heterogeneity. The approach consisted of the network K-function analysis, which provided an understanding of the significance of the spatial variation of blockages. A geographically-weighted Poisson regression then showed the degree of influence that explanatory factors had on increased blockage propensity in differentiated segments of the sewer pipe network. Lastly, blockage recurrence predictions were carried out with Random Forest ensembles. This approach was applied to three municipalities. Explanatory factors such as material type, number of service connections, self-cleaning velocity, sagging pipes, root intrusion risk, closed-circuit television inspection grade and distance to restaurants showed significant spatial heterogeneity and varying impacts on blockage propensity. The Random Forest ensemble predicted blockage recurrence with 60-80% accuracy for data from two municipalities and below 50% for the last. This approach provides knowledge that supports proactive maintenance planning in the management of blockages in sewer pipe networks.

PMID:33636665 | DOI:10.1016/j.watres.2021.116934

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Nevin Manimala Statistics

Cortical oscillations that underlie working memory are altered in adults with cerebral palsy

Clin Neurophysiol. 2021 Feb 11;132(4):938-945. doi: 10.1016/j.clinph.2020.12.029. Online ahead of print.

ABSTRACT

OBJECTIVE: This investigation used magnetoencephalography (MEG) to identify the neurophysiological mechanisms contributing to the altered cognition seen in adults with cerebral palsy (CP).

METHODS: Adults with CP (GMFCS levels I-IV) and demographically-matched controls completed a Sternberg-type working memory task during MEG. Secondarily, they completed the National Institutes of Health (NIH) cognitive toolbox. Beamforming was used to image the significant MEG oscillatory responses and the resulting images were examined using statistical parametric mapping to identify cortical activity that differed between groups.

RESULTS: Both groups had a left-lateralized decrease in alpha-beta (11-16 Hz) power across the occipital, temporal, and prefrontal cortices during encoding, as well as an increase in alpha (9-13 Hz) power across the occipital cortices during maintenance. The strength of alpha-beta oscillations in the prefrontal cortices were weaker in those with CP during encoding. Weaker alpha-beta oscillation within the prefrontal cortex was associated with poorer performance on the NIH toolbox and a higher GMFCS level.

CONCLUSIONS: Alpha-beta aberrations may impact the basic encoding of information in adults with CP, which impacts their overall cognition. Altered alpha-beta oscillation might be connected with gross motor function.

SIGNIFICANCE: This experimental work highlights the aberrant alpha-beta during encoding as possible neurophysiological mechanism of the cognitive deficiencies.

PMID:33636609 | DOI:10.1016/j.clinph.2020.12.029

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Increase rate of ruptured tubal ectopic pregnancy during the COVID-19 pandemic

Eur J Obstet Gynecol Reprod Biol. 2021 Jan 29;259:95-99. doi: 10.1016/j.ejogrb.2021.01.054. Online ahead of print.

ABSTRACT

OBJECTIVE: During the 2020 COVID-19 pandemic there was a decrease in emergency room arrivals. There is limited evidence about the effect of this change in behavior on women’s health. We aimed to evaluate the impact of the COVID-19 pandemic on the diagnosis, treatment and complications of women presenting with a tubal Ectopic Pregnancy (EP).

STUDY DESIGN: This is a single centre retrospective cohort study. We compared the clinical presentation, treatment modalities and complications of all women presenting in our institution with a tubal EP during the COVID-19 pandemic between 15 March and 15 June 2020, with women who were treated in our institution with the same diagnosis in the corresponding period for the years 2018-2019.

RESULTS: The study group included 19 cases of EP (N = 19) that were treated between the 15 March 2020 and 15 June 2020. The control group included 30 cases of EP (N = 30) that were admitted to in the corresponding period during 2018 and 2019. Maternal age, parity, gravity and mode of conception (natural vs. assisted) were similar between the two groups. There was no difference in the mean gestational age (GA) according to the last menstrual period. In the study group more women presented with sonographic evaluation of high fluid volume in the abdomen than in the control group (53 % vs 17 %, P value 0.01). This finding is correlated with a more advanced disease status. In the study group there was a highly statistically significant 3-fold increase in rupture among cases (P < 0.005) and a 4-fold larger volume of blood in the entrance to the abdomen (P < 0.002). We found that there were no cases of ruptured EP in the group of women who were pregnant after assisted reproduction.

CONCLUSION: We found a higher rate of ruptured ectopic pregnancies in our institution during the COVID-19 pandemic. Health care providers should be alerted to this collateral damage in the non-infected population during the COVID-19 pandemic.

PMID:33636621 | DOI:10.1016/j.ejogrb.2021.01.054

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ANFIS-MOA models for the assessment of groundwater contamination vulnerability in a nitrate contaminated area

J Environ Manage. 2021 Feb 23;286:112162. doi: 10.1016/j.jenvman.2021.112162. Online ahead of print.

ABSTRACT

The enhanced assessment of groundwater contamination vulnerability is necessary for the management and conservation of groundwater resources because groundwater contamination has been much increased continuously in the world by anthropogenic origin. The purpose of this study is to determine the best model among three ANFIS-MOA models (the adaptive neuro-fuzzy inference system (ANFIS) combined with metaheuristic optimization algorithms (MOAs) such as genetic algorithm (GA), differential evolution algorithm (DE) and particle swarm optimization (PSO)) in assessing groundwater contamination vulnerability at a nitrate contaminated area. The Miryang City of South Korea was selected as the study area because the nitrate contamination was widespread in the city with two functions of urban and rural activities. Eight parameters (depth to water, net recharge, topographic slope, aquifer type, impact to vadose zone, hydraulic conductivity and landuse) were classified into the numerical ratings on basis of modified DRASTIC method (MDM) for the input variables of ANFIS-MOA models. The Original ANFIS, and 3 combined models of ANFIS-PSO, ANFIS-DE and, ANFIS-GA used 95 adjusted vulnerability indices (AVI) as the target data of training (70% data) and testing (30% data) processing. The performance of 4 models was evaluated by mean absolute errors (MAE), root mean square errors (RMSE), correlation coefficients (R), ROC/AUC curves and predicted AVI (PAVI) maps. The statistical results, spatial vulnerability maps and correlation coefficients between PAVIs and nitrate concentrations revealed that the order of model excellence was ANFIS-PSO, ANFIS-DE, ANFIS-GA, and Original ANFIS, and that ANFIS-PSO showed the highest performance in training and testing processing. The performance rates of ANFIS-MOA models were also compared with 10 recent popular worldwide models using the correlation coefficients between PVI and nitrate concentrations, and they were superior to other recent popular models. ANFIS-MOA models were also useful for resolving the subjectivity of physical and hydrogeological parameters in original DRASTIC method (ODM) and MDM. It is expected that ANFIS-PSO models will produce the excellent results in assessing groundwater contamination vulnerability and that they can greatly contribute to the groundwater security in other areas of the world as well as Miryang City of South Korea.

PMID:33636625 | DOI:10.1016/j.jenvman.2021.112162

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The use of oxygen hoods in patients failing on conventional high-flow oxygen delivery systems, the effects on oxygenation, mechanical ventilation and mortality rates in hypoxic patients with COVID-19. A Prospective Controlled Cohort Study

Respir Med. 2021 Feb 12;179:106312. doi: 10.1016/j.rmed.2021.106312. Online ahead of print.

ABSTRACT

INTRODUCTION: Efforts to meet increased oxygen demands in COVID-19 patients are a priority in averting mechanical ventilation (MV), associated with high mortality approaching 76.4-97.2%. Novel methods of oxygen delivery could mitigate that risk. Oxygen hoods/helmets may improve: O2-saturation (SaO2), reduce in-hospital mechanical ventilation and mortality rates, and reduce length of hospitalization in hypoxic Covid-19 patients failing on conventional high-flow oxygen delivery systems.

METHODS: DesignProspective Controlled Cohort Study. SettingSingle Center. ParticipantsAll patients admitted with a diagnosis of COVID-19 were reviewed and 136/347 patients met inclusion criteria. Study period3/6/2020 to 5/1/2020. 136 participants completed the study with known status for all outcome measures. Intervention or exposureOxygen hoods/helmets as compared to conventional high-flow oxygen delivery systems.

MAIN OUTCOME(S) AND MEASURE(S): 1) Pre and post change in oxygen saturation (SaO2). 2) In-hospital Mechanical Ventilation (MV). 3) In-hospital Mortality. 4) Length of hospitalization.

RESULTS: 136 patients including 58-intervention and 78-control patients were studied. Age, gender, and other demographics/prognostic indicators were comparable between cohorts. Oxygen hoods averted imminent or immediate intubation/MV in all 58 COVID-19 patients failing on conventional high-flow oxygen delivery systems with a mean improvement in SaO2 of 8.8%, p < 0.001. MV rates were observed to be higher in the control 37/78 (47.4%) as compared to the intervention cohort 23/58 (39.7%), a difference of 7.7%, a 27% risk reduction, not statistically significant, OR 95%CI 0.73 (0.37-1.5). Mortality rates were observed higher in the control 54/78 (69.2%) as compared to the intervention cohort 36/58 (62.1%), a difference of 7.1%, a 27% risk reduction, not statistically significant OR 95%CI 0.73 (0.36-1.5).

CONCLUSION: Oxygen hoods demonstrate improvement in SaO2 for patients failing on conventional high-flow oxygen-delivery systems and prevented imminent mechanical ventilation. In-hospital mechanical ventilation and mortality rates were reduced with the use of oxygen hoods but not found to be statistically significant. The oxygen hood is a safe, effective oxygen-delivery system which may reduce intubation/MV and mortality rates. Their use should be considered in treating hypoxic COVID-19 patients. Further research is warranted.

TRIAL REGISTRATION: ClinicalTrials.gov Identifier: NCT04407260.

PMID:33636568 | DOI:10.1016/j.rmed.2021.106312